Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0161 ATGCAATTCCCAACTCTCACTTTCATTTTTCTTATCATTTTCAGCAATGTTTGCAATGCAAATGATTGTTCTAATCCTTCAAAAGTTCTTACTGTTGGTAAGATTGGGCGAGGAAAGTTCAGAACAATTCAAATGGCCATTAACTCTATCCCAATCCACAACACTCGATGGATTCACATCCAAATTGATTCAGGAAATTATAAGGAAAAGGTAACCATACCAATAGACAAACCATGCTTATGTCTCGAAGGAGCTGGAAGTTCTTCAACAACTGTTCTGTGGAGTGATCATAACCAAACATCTCAAAGTTATACTTTTGAGTCAAATGCACCTAACGTTATAGTCAAGGGCATTAAATTCGAGAACTTGTATAATAATCCGCCGGGTCAAGATGAAGATGAGAGAACTCTGCCAGCACTAGCAGGTGCATTGAGAGGAGACAAAACTGCAATCTATGACTGTGTCTTCAAAGGTGTCCAAGACACTTTAATGGATGATACAGGTCGCCATTATTACCATAATTGCTACATTCAAGGTCAAACTGATTTCATTTTTGGAAAAGGCCAATCAATCTATCAGAATTGCACAATTTTTTTTAAATCACGAGATGGTCGGAATGGTGCTATAGCAGCACAAAGGAGAGAGTCCATTGAAGAAACAAGTGGGTATGTGTTTAATGGATGCCACGTGGGTGGAACTGGAAATAGAACCATACTTGGAAGAGCTTATGGACCATATTCTAGGGTTATTATCGCCAATTCATATCTCTCTAGTGTGGTCGACCCTGTGGGATGGAATGCTTGGGATCAATCCGACGTTAATGTTTTCTATGAATATGGTTCTAGAGAAAAGATCACATTTGTGGAGGAAGGAAACAAAGGACCAGGGGCAAATAAGTCAAAGCGAGTGTCGTGGATGAAGCCCATGACCAAGGAGGAGCTCCGCAAGTTCTTGGATATCTCTTACATCGACGATGAGGGATGGCTAAAAAATGGACCAAACAATTTCAATTCTTAA 1017 0.3982 MQFPTLTFIFLIIFSNVCNANDCSNPSKVLTVGKIGRGKFRTIQMAINSIPIHNTRWIHIQIDSGNYKEKVTIPIDKPCLCLEGAGSSSTTVLWSDHNQTSQSYTFESNAPNVIVKGIKFENLYNNPPGQDEDERTLPALAGALRGDKTAIYDCVFKGVQDTLMDDTGRHYYHNCYIQGQTDFIFGKGQSIYQNCTIFFKSRDGRNGAIAAQRRESIEETSGYVFNGCHVGGTGNRTILGRAYGPYSRVIIANSYLSSVVDPVGWNAWDQSDVNVFYEYGSREKITFVEEGNKGPGANKSKRVSWMKPMTKEELRKFLDISYIDDEGWLKNGPNNFNS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0161 338 Pfam Pectinesterase 31 324 IPR000070 GO:0030599|GO:0042545
Alju13g0161 338 Gene3D - 28 337 IPR012334 -
Alju13g0161 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 330 - -
Alju13g0161 338 FunFam Pectinesterase 24 333 - -
Alju13g0161 338 SUPERFAMILY Pectin lyase-like 26 331 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0161 Alju-ChrAlju13 2623277 2628311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0161 40 268 Carbohydrate Esterase AT2G19150 45.957 3.92e-61 195