Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0149 ATGTATAAGAGGAATATTTCATCTACTTTGCAAACTCAAGACATGAATTCTAAGAAGCAAAGAGTTAATGATATAAATCTCTCAAACAACTTTAATGATTTCTGCGAATTTATTCCAAGTGGATTTAAGTTCTTACCAACAGAACAAGACTTGATTATGACCTATTTGAGGAAGAACGTTATGAATAAACCCTTAGAATCTAATCTAATCGCAGACGTGGATGTCTATAAGTACAATCCTGAACGACTATCTAGAGAGGGAAAATATAGAATTTGGAAATTAAGGCCAAAGCGATCAACCGAAGATGGGTATTGGAAGGCAACAGTGACGTGTGAGATGATTCATTCAGAAGATGGATTCACATTAATTGGGAAATGGAGAACTTTGGTTTATTATGAAGGCAATCATCAAAAGAGCAAGAAGACCGATTGGATCATGCGTGAGTACAATTTGGATGACTCAACCTATTCTGGAACAAATGCGAAGTGTCTAGCTCTTGAGATTGTCTGCTTTGAGGCATATTACCTCTCACTCAAGAGATGA 543 0.3628 MYKRNISSTLQTQDMNSKKQRVNDINLSNNFNDFCEFIPSGFKFLPTEQDLIMTYLRKNVMNKPLESNLIADVDVYKYNPERLSREGKYRIWKLRPKRSTEDGYWKATVTCEMIHSEDGFTLIGKWRTLVYYEGNHQKSKKTDWIMREYNLDDSTYSGTNAKCLALEIVCFEAYYLSLKR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0149 180 Gene3D NAC domain 47 170 IPR036093 GO:0003677|GO:0006355
Alju13g0149 180 Pfam No apical meristem (NAM) protein 39 151 IPR003441 GO:0003677|GO:0006355
Alju13g0149 180 PANTHER NAC TRANSCRIPTION FACTOR 56 38 154 - -
Alju13g0149 180 ProSiteProfiles NAC domain profile. 38 175 IPR003441 GO:0003677|GO:0006355
Alju13g0149 180 SUPERFAMILY NAC domain 37 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0149 Alju-ChrAlju13 1506933 1508249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0149 38 159 NAC Transcription Factor Family AT1G69490 41.606 1.53e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju13g0149 NAM 1.9e-19 No_clan