Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2081 ATGGTGGTGATCATGCAGCAGCAGCAGAATCCCTCTGCACTGGTGCCGCATCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCACCTCCTCCCTTAGGTCGCCGCCTGCTGCAACACCACTACCGGGGTCCCAGTTATCTTCCTCACTCCCTCTTGTTTCTCCGCTCCCCGCTCCCCTACGCCAAACTCATCTGCCATCACTGCCACCCGATCATGTTATTGGCCCAGTGGTGCCCATCGCCGCCACGCACCCTTCCGGTGAGCCCGCTTTGACAGTGCCACCTGCCTGCCCTTTGCCTAGAGTCCGACTCTCGGATATTGCCCTTTACGACGGAGCTCCCGCTGGGTCCTACGTCAGAGCAGTGGAAGTCCTGTCAGGGTCTTTGATGAGGCATAATGCAGCCTTGATCGAATTGGGTTGCGAGGATACCGCTCTGATGAGGTGCGGATTGGAAGGTTCGAGATTGTTCTTTCGGAGCAGGGCCCATCTGGGTGGTGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTGGGATTCATCTCCACCATGTGTGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTACTACTTTGTGTGCCATTGCTAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCGACCTACTCACACTCTTCTTTGCCAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCATGAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATATCTTCAGATACACCTGGTCTTCAGGTCTGTGACCCCAATGGCCGCTGGTATCTTGCTGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGTCAAGCCACTGCAGGGCTTCGTCCTGCAGCATTATATAGAGCTTCACCTGATTATTTTCTAGGTGCTAACAGTGGAGGAAGGACATCTCTTGCATTTAGACTCATGCCACAGGGCAATGCTATATTGGACTGTTCTCCAATTGCAGCAGCTGGACATGTTATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAGTTCATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGTTGCTGGAAACAATATGAATAAGGAACAATCACTGAGAAGTGTTCTGTCAGATCCTTTTTCTGGCGCATTCCTTGAAGACGCCATGCTTGTCTCGTGTGGGCATTCATTTGGTGGTCTCATGCTAAGGAGAGTCATCGAAACTTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCGGCAGCCACAGCAGTCAAACATGAGGATGATCGGCGGTTATTTCATAATGCTGTTCTTCGAAAGCGCCGGAAAGAAATGGGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGAAAATGGAGATGTTACTGGTGATGATGGACCTGTCCGGGGAGTACAGTATCCTTTTTCAGTAAATGAGAAGGTGATAATTAAGGGTAATAGGAGGACACCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGTACTGGGGAAAATGTGCGCTTGCAATACCGTTCTCTTAGGAAGCTATTGAACTCTCAAGCGATAGAGGGCCAGTCACAGCCAATTCAAAATTGCAGCTCTTAA 1797 0.4875 MVVIMQQQQNPSALVPHLNNNPQSSSATTTSSLRSPPAATPLPGSQLSSSLPLVSPLPAPLRQTHLPSLPPDHVIGPVVPIAATHPSGEPALTVPPACPLPRVRLSDIALYDGAPAGSYVRAVEVLSGSLMRHNAALIELGCEDTALMRCGLEGSRLFFRSRAHLGGGKGSRGVHMYRAGRALEDWDSSPPCVADIFRCMGKAARTTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHSSLPNGKGAIGGGKPTMNGEIEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLRPAALYRASPDYFLGANSGGRTSLAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEVIGSRSYHTYVAGNNMNKEQSLRSVLSDPFSGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRTNRENGDVTGDDGPVRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSQAIEGQSQPIQNCSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2081 598 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 477 IPR013083 -
Alju12g2081 598 Gene3D - 175 389 IPR027443 -
Alju12g2081 598 SUPERFAMILY Clavaminate synthase-like 192 359 - -
Alju12g2081 598 SUPERFAMILY RING/U-box 409 475 - -
Alju12g2081 598 Coils Coil 484 504 - -
Alju12g2081 598 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 98 594 - -
Alju12g2081 598 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2081 Alju-ChrAlju12 41705123 41717996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g2081 409 579 Plant U-box Gene Family AT5G05230 42.197 1.94e-38 143