Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2078 ATGTCGCGTCAGACTCCCACCTCCGCCTTTATTAAATCCAAGACCCTCGACAATAAATATATGCTTGGAGATGAGATAGGGAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGAGACTTCGTTGCAATTAAGCAAGTTTCATTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATCTATTAAAGAATTTGAATCATAAGAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTTCACATTATTCTTGAGTATGTGGAAAATGGTTCACTTGCTAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTAGTTGCTGTTTATATTGCTCAGGTATTGGAAGGCTTGGTTTACCTACATGAACAGGGTGTCATCCATCGGGATATCAAGGGTGCAAATATATTGACAACCAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGGGTAGCAACAAAGTTGACTGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTCATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGTGTGCCTCCATATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTGATAGCCTGTCTCCTGATATCACTGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAGACACTGTTATCTCACCCATGGATACAAAATTGTAGGCGTGCGTTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCTGCAGATTTAGCAGCTTCTGAACATCAGAAGAGTGCTGGTGAAGGCTTAGCCGTGGAGAAAGTGAACCCATTGAAAGAGTTGTCAATTGAGGTTGCTGGTGGCAGCAAACATCGTGAGGACGTAGGTTCAGATTCTGATTTTCTGAATGAGAAAACAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGTTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGAGAAGTTGCTATCACTGAGATGAGTGCTGATCATGACACTCCCAATACTAAGGACCATAATGAAGTCATGATGCACGGAGAAGTTGGATCTCCAGAATCAAGAGGGATAGATAGAAGGCCTGGGGGAAAAGGTAGTTCTGTCACCAGTGGCAGTATATCATTCTGTTTTGGACCAAGAGGTCAGGATAATGGTTCCCTAAAGGCTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCCCCTGGAGATGCCTCTTTAGATGATTTATTTCATCCATCAGATAAACACCCTAGAGACTCTGCAGCTGAGGCTTCCACATCTGCATCCACATCACACGTGGCAAATGATAATGCATCCATTAACAATGGTGGAAAAAGTGACCTGGCGAAAGAGTTAAGGGAAACTATTGCTCGGAAGCAGTGGGAGAAGGAGATGGAAAATGGAAAGGAAAATAGTGGTGGGAATCTTTTACGGTTAATGATGGGAGTCATAAAAGATGATGTAATTGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGAGAAAACCTGTTCCCTTTGCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGGCCGGACGAATCTGAAGATGTGATTGTCACTGCATGTCAGAAACTTATTGCTATCTTTCACCAACGTCCTGAGCAGAAGATTGTTTTTGTAACCCAGCATGGTTTACTTCCTCTTGCAGACTTGCTAGAAGTTCCTAAAACTCGTGTCATATGTTCTGTACTGCAGCTTATAAATCAAATCATTAAGGATAATACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCCATGGTGATGAGCTTTGCAGTACCTGATCGTCCACGAGAAATTCGCATGGAAGCAGCTTTTTTTTTGCAGCAGCTTTGTCAGTCAAGCTCTTTGACATTGCAAATGTTTATAGCTTGTCGTGGAATCCCAGTTTTAGTAGGATTTCTGGAGGCTGATTATGCAAAGTACAGGGAAATGGTACATCTGGCTATTGATGGCATGTGGCAAGTCTTTAAGCTTCAGCGATCAACCCCTAGAAATGACTTTTGTCGAATAGCTGCCAAGAATGGAATACTCCTGAGGCTTATAAACACCCTGTATAGCTTAAATGAGGCAACACGACTAGCTTCTATATCTGTTGGGGTTGGATTTCCAGTTGATGGTTTGGCTCAACGTCCACGATCTGGTCCCTTGGATTCAACACATCCTATTAGCATTCAGAATGATGCACTGCTGTCTTCGGCAGACCAGTTGGATCTCCCTAAAGCGAGGCACGGGATACTTGACCATCACTTGGAACCATTACATGCCTCAACCTCACATCCTCAAAGATCAGATGGTAACTACTCTGTAGACGTTGATAGGCTTCAATCTAGCAATGCAGTGGCTGAATTTACATCAGAAAAGAGTGCAAATGCTGCATCCAGGGAATCTTCAAAGGAGAGAGACAATGTGGATCGATGGAAAACTGATTCTTCTCGAGCAGATGTTGAACTTAGACAGCAGCGTATTGGTAATTCTGCTAGCAGGGCATCAACAGATAGGGCTTTGAAACTGACAGAACCTGCATCGAATGGATTATCACTGGCGGGAGCTACACAGCAAGAGCAAGTCAGACCTCTTCTTAGCTTGTTAGAGAAAGAGCCTCCATCTAGACAAATATCTGGTCAGCTTGAATATGTGCGCCAGTTGTCAGGATTAGAAAGGCATGAAAGTGTACTCCCTTTACTACATGCCTCTGAGAAGAAGACAAATGGTGAGCTGGACTTTTTGATGGCAGAATTTGCAGATGTTTCCCAACGTGGAAGAGAAAATGGAAATCTTGACACTGGTGCTAGGGTGTCTTACAAAGCTGCTTCAAAGAAACCAGGGGCTTTTGGGTCTAATGAAGGGGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCTTCCGGTGTGCTGTCTGGTTCAGGCGTCTTAAATGCCAGACCAGGCAGTGCAACTTCATCTGGGCTCCTTTCCCACATGGTTTCATCGTTGAATGCTGATGTTGCCAGGGAGTACCTAGAAAAAGTAGCAGATCTTTTGCTTGAGTTTGCTCAAGCTGACACGACAGTGAAGTCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCAGATTCTGTTAAAGATTCTGAAGTGTATTAATCATCTGTCAACTGATCCTAACTGCTTGGAGAATCTCCAACGTGCTGAAGCAATAAAATACTTGATACCAAATTTGCAACTCAAAGAAGGGCCTCTAATATCACAGATACACCATGAGGTCTTGAATGCACTGTTCAATTTATGCAAGATAAACAAGAGGAGGCAAGAACAAGCTGCTGAAAATGGGATTATTCCCCATTTGATGCAATTCATCACCTCAAATTCTCCCTTGAAACAATATGCATTGCCTCTATTGTGTGACATGGCCCATGCATCTCGAAATTCACGGGAGCAGTTAAGGGCCCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGACGAGATTTGGTCAGTGACGGCATTAGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAACAGGAAGGTTGAACAAGCACTACTGAAAAAGGATGCAGTGCAGAGGCTGGTGAAGTTCTTCCAGACTTGTCCAGAGCAGTATTTTGTGCACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGTACGGATCAATACCACATTAGCTGTTAATGGATTAACGCCCTTACTGATTGCAAGGCTTGATCATCGAGATGCTATAGCTCGTCTTAATTTACTCAAGCTGATAAAGGCTGTTTATGAGCACCACCCTCAGCCCAAGAAACTGATTGTGGAGAATGATTTGCCTCAGAAGCTACAGAACTTAATAGAGGAAAGAAGAGATGGACAAAGCTCGGGAGGCCAAGTGTTGGTCAAACAGATGGCTACTTCCTTACTTAAAGCTCTACACATAAACACCGTTTTGTGA 4215 0.4261 MSRQTPTSAFIKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSADLAASEHQKSAGEGLAVEKVNPLKELSIEVAGGSKHREDVGSDSDFLNEKTEKQDDVFSDQVLTLAIHELSLQTGSSKPCSNGEVAITEMSADHDTPNTKDHNEVMMHGEVGSPESRGIDRRPGGKGSSVTSGSISFCFGPRGQDNGSLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPSDKHPRDSAAEASTSASTSHVANDNASINNGGKSDLAKELRETIARKQWEKEMENGKENSGGNLLRLMMGVIKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLRPDESEDVIVTACQKLIAIFHQRPEQKIVFVTQHGLLPLADLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPMVMSFAVPDRPREIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGVGFPVDGLAQRPRSGPLDSTHPISIQNDALLSSADQLDLPKARHGILDHHLEPLHASTSHPQRSDGNYSVDVDRLQSSNAVAEFTSEKSANAASRESSKERDNVDRWKTDSSRADVELRQQRIGNSASRASTDRALKLTEPASNGLSLAGATQQEQVRPLLSLLEKEPPSRQISGQLEYVRQLSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDTGARVSYKAASKKPGAFGSNEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPQILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLQLKEGPLISQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEIWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQRLVKFFQTCPEQYFVHILEPFLKIITKSVRINTTLAVNGLTPLLIARLDHRDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQNLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2078 1404 MobiDBLite consensus disorder prediction 900 915 - -
Alju12g2078 1404 Gene3D - 1046 1208 IPR011989 -
Alju12g2078 1404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Alju12g2078 1404 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Alju12g2078 1404 Gene3D Transferase(Phosphotransferase) domain 1 17 311 - -
Alju12g2078 1404 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g2078 1404 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g2078 1404 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g2078 1404 FunFam MAP3K epsilon protein kinase 1 576 790 - -
Alju12g2078 1404 MobiDBLite consensus disorder prediction 875 899 - -
Alju12g2078 1404 SUPERFAMILY ARM repeat 1065 1377 IPR016024 -
Alju12g2078 1404 CDD STKc_Cdc7_like 19 274 - -
Alju12g2078 1404 MobiDBLite consensus disorder prediction 491 513 - -
Alju12g2078 1404 MobiDBLite consensus disorder prediction 461 514 - -
Alju12g2078 1404 SMART arm_5 612 652 IPR000225 GO:0005515
Alju12g2078 1404 SMART arm_5 1184 1223 IPR000225 GO:0005515
Alju12g2078 1404 MobiDBLite consensus disorder prediction 865 917 - -
Alju12g2078 1404 MobiDBLite consensus disorder prediction 411 433 - -
Alju12g2078 1404 FunFam MAP3K epsilon protein kinase 1-like 1053 1399 - -
Alju12g2078 1404 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Alju12g2078 1404 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Alju12g2078 1404 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Alju12g2078 1404 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Alju12g2078 1404 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Alju12g2078 1404 Gene3D - 1209 1396 IPR011989 -
Alju12g2078 1404 Gene3D - 571 781 IPR011989 -
Alju12g2078 1404 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 726 - -
Alju12g2078 1404 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Alju12g2078 1404 SUPERFAMILY ARM repeat 583 778 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2078 Alju-ChrAlju12 41647116 41673891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g2078 1 1404 MAP Kinase Kinase Kinase AT3G13530 73.234 0.0 2001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Alju12g2078 Pkinase 9.3e-73 CL0016