Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2071 ATGTACTTTAGGAGAATACAATGTCGAGATTGGAGGCGGGGCATTTCGTTTCAGCCACCCAAATACTTTAGGCCAAGATGCTATGGTCATGCATGCTTTCAACCTCAGTGCCCTAAGACTACTGTGGAAGAATGTGTTTCGCATGATAGCATAATAAGGAGACGTCTATTGGAATCCTTTTTATCTAGGGTTGCATCATCTAATAATAATTGTACTGATCTGAACAGAAGGCCTAGTTTATTTTTCAGAAGCACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATTTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAGAACTGGCATGATAAGTTTGGGGAAGATGCGAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTAACGAGAAAGGATAAGTTCAAAAATGAATTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATGTTCATGAGAATACCAAAAAACTTCTGGTTGAATGTGCTGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGCACTCGCCTCTCATCTTCAAGCGGGAGGATATTGCTCCAGAGCGTTCCTGGTACTGAGCTCTATCGAGAGAGATTAGTTAGAGCCCTTGCACAAGATCTAAAAGTCCCTTTACTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATTGATGATGACTTGTCATCATCAGATTGCGAGTCTGATGATGATAATGCAGAATCTGGAGAGGAGGCTTCTCTGGAGTCAGAGGATGAAGATGATAACAATGCAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCCAGTGATAACGAAGAACATGATGCAATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAGTTCTGAGCCAACCAAATCTGAGGTTGTGAAGCCTTCCGACCACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCGTCTGTTCAAATGAAAGACAACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCTTACACTAATTTCCATGGCAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGTTGCTGTCATCATGGACATCAGCGAAGATAATATGAAGGACAGTGAGATGGAGAAATCTAATGAACATACAGAATCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCTTGATGCTCAAATACAGGATTGCTACATAGCTATGGAGGCTCTATGTGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACGGTACACAGTGGTTTCATAAATCAGTCCTGAAGTCGAACAGAAAAGAGTTCTTTCGTAAGGTTCAAGAAATGTTTCACAAGTTGTCTGGACCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACGAAGAGACTGGATGATGATGAAATCCACAAGCTTTTCACTAATGTTTTGTGCATAAATCCGCCTAAGGAGGAGGATCAGCTTGGAACTTTCCAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAACTACATAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAACACCCACGGTCTCATTCTGACAAAGCAAAAAGCTGAAAAGGTGGTGGGCTGGGCCAAAAATAATTACTTGTCATCTTGCACACTTCCTTATGTTAAAGGAGAAAGATTGTGCCTGCCTCGTGAAAGTCTTGAAACTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCTTCTCAGGGTCTGAAGAACCTTGCCAAGGATGAGTATGAGAGCAACTTTATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTCATCCTTCCGATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCACGAGGGGGTGCTTTCGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATACTGAAAATCGGATGAAGATTTTAAGAATCTTCCTTGAACAAGAAAATCTTGATCTTGATTTTCAGTTCGACAAACTCGCTAACTTGACTGAGGGATACTCTGGCAGTGATCTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTTCTAGAGAATGAAAAGAAGGCGAGCTACAGTGTCTTTACACCGACATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCTAAGGTTGGGCCATCAGTTGCCTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGTAGGACAAAATCTCCATTTGGATTTGGAAGCTAA 3123 0.4175 MYFRRIQCRDWRRGISFQPPKYFRPRCYGHACFQPQCPKTTVEECVSHDSIIRRRLLESFLSRVASSNNNCTDLNRRPSLFFRSTQLRFYSSESDGRNASEDKHLNANDGAHCDKGKNWHDKFGEDAKLCNAHARLGEQDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYVHENTKKLLVECAASHLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSDCESDDDNAESGEEASLESEDEDDNNASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEESESSEPTKSEVVKPSDHQSGCQLKKGDRVKYIGPSVQMKDNNRIILGKILTSDGPTNAYTNFHGRSLSNGQRGEVYEVEGDQVAVIMDISEDNMKDSEMEKSNEHTESRLCWIHVKDIEHDLDAQIQDCYIAMEALCEVLDSKQPLIVYFPDGTQWFHKSVLKSNRKEFFRKVQEMFHKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDDEIHKLFTNVLCINPPKEEDQLGTFQKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLQVNTHGLILTKQKAEKVVGWAKNNYLSSCTLPYVKGERLCLPRESLETAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDTENRMKILRIFLEQENLDLDFQFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYSVFTPTLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2071 1040 MobiDBLite consensus disorder prediction 354 387 - -
Alju12g2071 1040 Pfam AAA+ lid domain 940 975 IPR041569 -
Alju12g2071 1040 Gene3D - 919 1004 - -
Alju12g2071 1040 SMART AAA_5 783 920 IPR003593 GO:0016887
Alju12g2071 1040 MobiDBLite consensus disorder prediction 274 305 - -
Alju12g2071 1040 MobiDBLite consensus disorder prediction 354 372 - -
Alju12g2071 1040 Gene3D - 746 1022 IPR027417 -
Alju12g2071 1040 ProSitePatterns AAA-protein family signature. 890 909 IPR003960 GO:0005524|GO:0016887
Alju12g2071 1040 Pfam ATPase family associated with various cellular activities (AAA) 787 917 IPR003959 GO:0005524|GO:0016887
Alju12g2071 1040 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1033 - -
Alju12g2071 1040 MobiDBLite consensus disorder prediction 274 324 - -
Alju12g2071 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 746 1009 IPR027417 -
Alju12g2071 1040 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 745 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2071 Alju-ChrAlju12 41564219 41576906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g2071 746 988 Calmodulin-binding Proteins AT3G56690 38.492 1.31e-41 164