Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2050 ATGGCTCACGAAAGCAAGCGGCTGGATAATGACGACACGCCTCCACTGCCTCAGTACTACAATTCTGAGAAGCAAGACGGCGATGATGAAGAGGGCATGGGACGCAAGGATCGTTCCGAGAATCAGCCTTCGGCGGAAGGCAGCGGTGGAGGAGAAAGGGGGGTAAAGCAAGAAAGTCTCTATCTTGACACTGAACAAGCAAAATTCCGGTTTAAGCAAGAAAGTTTCGGTATTGACTCCGAACAAGTGAAAATCGGGTTAAAGCAAGAAAAATTCGATCTTGAAGTTGACACCGAACAAGCGAAAATCGACCACTTAACGGAAGGCACCAAAATTGTCAAGAAAAGCCGCGGCAGAAAGCGTAAGGCAGAGACAGAGGCCTCTGGGAACGAGGTTTCGGCAGAGGCGACGAGGCGTAGTGCTAGAGTATCGCAGAAATCGTTCTGTCCTGTTTACTTTTACGACGACGAAGACGAGGAAGATGAGCCTAGAAAAAGGAAACATAGGAGAAGTCGTAAAAAGACAAAAATTGAAGAAGGTGCAGGAGCGGAGGACAATGGTGATTTAGCTGTGGAGAAGTTAGGACATTTGAAGCAGAGTGATCCTGAGGTTGCCGTGGAGGACTGTGGTCTCGAAGAAGTAGGAAGCGGAGATAAGAAAATTCCAAGGCGTAGGAAGCCGGCTCAAAACATGAAGGCAGAACACGTAGTATCGGATGATCATTGCCCAATGAGAACGGCCAGAGATTCTTCAGAAAGCAGATCTACTAAAGCCTATAGTTTGAGGGCTTCTAAATCTGAAGTTAAGAAGCAGGAGACGACCAAAATAAACAAGCAAGATCCTGAATGGATTGAAAAGGTGTCCTTAATGTGCCATCAGTGTCAGAGAAATGATAAGGGGGAGGTTGTTAGGTGTACAAAATGTAAACGGAAAAGATTTTGCATCCCGTGTTTACAGAGTTGGTATCCTCAATTGAGAGAGGAAGACATTGCTGAGGAGTGTCCTGTGTGCCGTGGAAACTGCAATTGCAAAGCATGTCTGAAATCTGATAAATTTATTGCAACAATGAAGAACAAAGCAATAAAGAAGAAGGAAGCAAAACATGTCACAACTGAGGAAGTTGAATACTATAAGTATTTCCTATCTGTGCTTCTTCCATATTTAAGGCAGCTACATGAAGAACAAATGATGGAGAAGGAGATTGAAGCTAAGAGACAAGGCGTCTCACTTTCAGAGCTTCAGGTAGGAAGGACAGATTGCACAGATAATGAGCGTGTTTACTGTGACAATTGTAAAACTTCAATTTTTGATTGTCACCGAAGCTGTCAAGAATGTTCTTTAGACCTCTGTCTGGTCTGTTGCCGTGAGATTCGTCAGGGGCAATTGGTTGGAGGTGCAGAGCCAGTTAAGTCTGAATTTATCAGCTGGGGGTTAAAATATATGCATGGTGGGGAAAAGGAGTCAACAACAACTAAATTAAATGTTGAGACGAAGAGTGAGGATCGTGATTGGCCCAGATCTGGTTTGAAGGTGACAAGTGATGGTAGCATCTCTTGTCCAAGGGATCATGGTGTTTATGGTTGTAGTTATCTTGAACTTCGATGTATATTTCCTGATAACTGGATATCTGAACTTGTAAAGAAAGCAGAAGATATGGCCAAAGTGTTTAAGCTTGATGATGCAACACAGATATGTAACCAGTGGTGTTCATGTTTCAACCTAGATGGCATTAACAACAACGTTGAAAATGAGAATAGGAGGAAGGCTGCTTCTCGTGAAGATCCCAATGTTACTGACAACTATATATACTGTCCAAGGGCTGTAGATTTAGGACCTTTGGACCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGAAGACTAAGACCAAGCACGATCAACATTTGGAAGTGAAGGTCCTTGATTGCTTGGACTGGTGTGAGGGAGACATCAATATCCACCAATTCTTTACAGGGTACACAGAAGGTCGAAAAGATTTTGATATGTGGCCTCAGTTACTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACGATTACCACGTCATTGCGCCGAGTTCATTTCTTCCTTACCGTACAAGGAATATACAAATCCTCATAATGGTGTTCTAAACCTTTATTCAATGTTGCCAGACAAATGTATAAAGCCGGATATTGGTCCGAAGACATATATAGCATATGGAATTCCTATGGAGCTTGGGCGGGGTGATTCAGTGACAAAGCTTCATTGTGACATGTCTGATGCAGTGAATGTTTTGACTCATACTTTTGAGACGCCCCTTGATGCTTGTCTCCTTGAAACAATAGAGGATTTGAAAAAAAAACACCTTGCACAAGATAGAGAGGATCTACATGGTGATTTGCAAGAAGCGGAAGCTAATGTTGAAAATGAAAATACTTCAGTTTTTGAAAATAAGTTGCTTGGATATGATTCTGTTGAGGGAGGTGCTCTCTGGGATATTTTTAGGAGACAGGATGTCCCCAAACTGCAGGAATACCTTAAGAAGCACGTAAAAGAATTCAGGCATGTCAACTGCATTCCATTGCGGGAGGTTGTTCATCCTATCCATGACCAGACCTTTTATTTGACTATGGATCATAAGAGGAAGCTGAAGGAGGAATATGGAATAGAACCATGGACATTTGTTCAGAAACTGGGAGACACAGTTTTGATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTCAAGTCATGCATCAAGGTTGCTCTCGATTTTGTGTCACCTGAAAGCATAGATGAGTGTTTTCGTTTAACACAGGAATTTCGCACACTTCCCATAAATCACAGGGCTATCGAGGACAAATTGGAGGTCAAAAAAATGCTCATTCATGCAATGAGCAACGTAGTGGGGAAATTGGAGGGAGCAAGGAAGAATGAAGCTAATGGTCAATTGGAAGCAGTATCTTCCTAG 3042 0.4277 MAHESKRLDNDDTPPLPQYYNSEKQDGDDEEGMGRKDRSENQPSAEGSGGGERGVKQESLYLDTEQAKFRFKQESFGIDSEQVKIGLKQEKFDLEVDTEQAKIDHLTEGTKIVKKSRGRKRKAETEASGNEVSAEATRRSARVSQKSFCPVYFYDDEDEEDEPRKRKHRRSRKKTKIEEGAGAEDNGDLAVEKLGHLKQSDPEVAVEDCGLEEVGSGDKKIPRRRKPAQNMKAEHVVSDDHCPMRTARDSSESRSTKAYSLRASKSEVKKQETTKINKQDPEWIEKVSLMCHQCQRNDKGEVVRCTKCKRKRFCIPCLQSWYPQLREEDIAEECPVCRGNCNCKACLKSDKFIATMKNKAIKKKEAKHVTTEEVEYYKYFLSVLLPYLRQLHEEQMMEKEIEAKRQGVSLSELQVGRTDCTDNERVYCDNCKTSIFDCHRSCQECSLDLCLVCCREIRQGQLVGGAEPVKSEFISWGLKYMHGGEKESTTTKLNVETKSEDRDWPRSGLKVTSDGSISCPRDHGVYGCSYLELRCIFPDNWISELVKKAEDMAKVFKLDDATQICNQWCSCFNLDGINNNVENENRRKAASREDPNVTDNYIYCPRAVDLGPLDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQKTKTKHDQHLEVKVLDCLDWCEGDINIHQFFTGYTEGRKDFDMWPQLLKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTNPHNGVLNLYSMLPDKCIKPDIGPKTYIAYGIPMELGRGDSVTKLHCDMSDAVNVLTHTFETPLDACLLETIEDLKKKHLAQDREDLHGDLQEAEANVENENTSVFENKLLGYDSVEGGALWDIFRRQDVPKLQEYLKKHVKEFRHVNCIPLREVVHPIHDQTFYLTMDHKRKLKEEYGIEPWTFVQKLGDTVLIPAGCPHQVRNLKSCIKVALDFVSPESIDECFRLTQEFRTLPINHRAIEDKLEVKKMLIHAMSNVVGKLEGARKNEANGQLEAVSS 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2050 1013 Gene3D Cupin 608 975 - -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 130 144 - -
Alju12g2050 1013 ProSiteProfiles JmjC domain profile. 735 966 IPR003347 -
Alju12g2050 1013 SUPERFAMILY Clavaminate synthase-like 611 988 - -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 215 274 - -
Alju12g2050 1013 Pfam JmjC domain, hydroxylase 853 949 IPR003347 -
Alju12g2050 1013 ProSiteProfiles Zinc finger RING-type profile. 291 338 IPR001841 -
Alju12g2050 1013 CDD cupin_RmlC-like 890 950 - -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 215 252 - -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 108 128 - -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 23 42 - -
Alju12g2050 1013 Coils Coil 810 837 - -
Alju12g2050 1013 SMART cupin_9 716 966 IPR003347 -
Alju12g2050 1013 Coils Coil 574 594 - -
Alju12g2050 1013 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 47 1001 IPR045109 GO:0032454|GO:0033169
Alju12g2050 1013 MobiDBLite consensus disorder prediction 1 60 - -
Alju12g2050 1013 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 288 363 IPR018866 -
Alju12g2050 1013 MobiDBLite consensus disorder prediction 108 191 - -
Alju12g2050 1013 FunFam Transcription factor jumonji domain-containing protein 599 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2050 Alju-ChrAlju12 41338216 41360491 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju12g2050 JmjC 1e-14 CL0029