Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju12g2035 | ATGTCTCAGACATCTGGGCTACTCCCTGCTTTCCAGTCTCTCGAAGCATTGCAACCTAGTGCCAAGTTCACAGCTGATCCAATACTTGCTTTTGTGGAAAAACATGAAAACTGTGCACTAGGAAGGGAGGTTTCTGAGAGAGTTCAAGACCCTGCTGGTGATATGGATCTTTTTGATGAGGATTCGCCATATAGTGGAAGAACTACATCGTTAGAAAGTAGGCCTTCTGCTGGTGACGATGGTACAGAATCTGCTCCTCAGCCACTCCCCTCAATCTCCCCATCGTCCAGTGACCACAGGTGGAGTGATACAACACCTTATGTTTCAAAGAAGAAGATTCATTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATATCCACATCTGGGACGGAATCTGTTATCACATTGCCTGATGGGAAAGTTTTAAAGGTTAAAGCTGAAAGTTTGGTTCCAGCAAACCCTGATATTCTTGATGGAGTGGATGACCTTATGCAGCTTAGTTATTTGAATGAACCATCAGTGTTATACAACCTGCAATATAGATACAACCGAAATATGATTTACACAAAAGCAGGGCCTGTTTTGGTTGCAATAAACCCATTTAAGAAAGTTCCTCTGTATGGAAATGATTATATTAAAGCATACAAGAATAAAGCTATGGAAAGCCCTCATGTATATGCCATTACAGACACAGCCATCCGGGAAATGATAAGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGCAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCCGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATTCTAGAAGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAACTTATTGAGATTCACTTCAGTGAAACTGGAAAAATATCGGGTGCTAATATTCAGACATGTAAGTTTACTGCTGTATTTATGGTTCAAACACTATCTCTGATTCCGTTTGAAGGTTTTAACCATCATATTTCTTTTCACATGTCGAATTCCAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATACCATATTTTCTATCAGCTGTGTGCTGGGGCACCGTCTTCTCTGAGGGAGAAGCTAAATCTACAAAGTGCGGAAGAATACAAATATCTGAGGCAGAGCAATTGTTTTTCCATTACTGGCGTTAATGATGCGGAAGAATTTCGCATGGTCATGGAAGCCTTGGATGTTGTCCATATCAGCAAAGAAAATCAGGAGAATGTATTTGCAATGCTTGCTGCAGTGTTATGGCTAGGGAACATATCATTTACTGTGATTGATAATGAAAATCATGTTCAACCCGTAGAAGATGAGGGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGAGGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGGAACGACATCATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGCTTTAGCAAAGTCAATATATGCTTCTCTGTTTGATTGGCTGGTTGAACAAATAAACAATTCACTAGCTGTTGGTAAAAGACGCACTGGTAGATCAATCAGTATTTTAGACATCTATGGATTTGAATCTTTCGAGAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCGAATGAGAGATTGCAGCAACACTTCAACCGTCACTTATTCAAGTTAGAACAAGAGGAATATATACAGGATGGCATTGACTGGACTAAAGTTGAATTTGAAGACAACCAAGATTGTCTTAATCTTTTTGAAAAGAAGCCGCTGGGGTTACTATCCCTTTTGGATGAGGAGTCCACTTTCCCAAATGGTACTGATTTGACATTTGCTAACAAGCTTAGACAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAAGGCCTTTGCTGTGTGTCATTATGCAGGGGAGGTCACGTATGATACAACTGGATTTTTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATTCAACTTTTATCCTCATGCACATGCCATCTTCCTAAGCAATTTGCAGCCCATATGCTTTTGCAGTCTGAGAAGCCAGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAGTTCAAGGGTCAACTGTTTCAACTGATGCAACGTTTGGAGAGCACCACACCGCATTTTATTCGATGCATTAAGCCTAATAACTTCCAGTCACCAGGATCATATGAGCAAGGGCTTGTTCTCCAGCAACTGAGATGTTGTGGAGTCTTGGAAGTCGTTCGAATATCAAGATCAGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCTAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTACATCAGTTTAGTATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAATGCTTGAAGATACTAGAAACCGTACCCTCCATGGTATCTTACGTGTCCAAAATTGCTTCAGGGGTCACCGAGCACGCTGTTATCACAGGGAGCTCAAGAGAGGAATCACTACTCTCCAGTCATTTATTAGGGGAGAGAAAACAAGAAAGGAATATGCAGCCTCACTTCGGCAACATAGAGCTGCTGTTGTTATACAGAAGCAGATGAAAGCAGTGTTTGCCAGAAGAAGAATGAAGAATATTTGTGATGCTTCGATAGTCATTCAATCAGCTATTCGTGGTTCTTTGGCCAGAAGATGCTCAGGAGATATGGGATTGTTGAAATCTATAGGGATGAAGACGAACGAGTCAGACGAAGTGCTAGTTAGGACTTCTTTTCTGACTGAATTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTGAGAGTGAAGAAAGAGGAAAATGACATTCTTCACCAGCGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATCAAAGATGAAATCAATGGAAGAAGGTTGGCAGAAACAAATGAGATCACTACAATCTAGCCTCTCCATTGCAAAAAAGAGCTTGGCAATTGATGATTCTGCAAGAAATTCGGATGCTTCTGTAAATGCAAGTGATGATAGAGATTATAGTTCAGACATAGGAAGCCATCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAACTATCACAGACGCCAAGAAAGCAATGGGTTTAGATCAGTGGGTGCAGGTTTGAACGTCATAAGTGGGTTGGCTCATGAATTGGATCAGAGGCGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTTGAGGCAAATTTGAATCCAGACCAGGAGCTTAGAAGGTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCAGCAAGACTACGTGAAACAAAAGCAATTTTAAGTAAGCTTGGGAGTGAAGAAGGTGCAATGGACAAAGTGAAGAAAAGGTGGTGGGGAAGAAGGAACAGTACGAGGTTTAGTTGA | 3597 | 0.4126 | MSQTSGLLPAFQSLEALQPSAKFTADPILAFVEKHENCALGREVSERVQDPAGDMDLFDEDSPYSGRTTSLESRPSAGDDGTESAPQPLPSISPSSSDHRWSDTTPYVSKKKIHSWFQLPNGNWELGKIISTSGTESVITLPDGKVLKVKAESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNRNMIYTKAGPVLVAINPFKKVPLYGNDYIKAYKNKAMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFTAVFMVQTLSLIPFEGFNHHISFHMSNSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLQSAEEYKYLRQSNCFSITGVNDAEEFRMVMEALDVVHISKENQENVFAMLAAVLWLGNISFTVIDNENHVQPVEDEGLFNVAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYASLFDWLVEQINNSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGKAFAVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPKQFAAHMLLQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFSILPEMYQVGYTKLFFRTGQIGMLEDTRNRTLHGILRVQNCFRGHRARCYHRELKRGITTLQSFIRGEKTRKEYAASLRQHRAAVVIQKQMKAVFARRRMKNICDASIVIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVRTSFLTELQRRVLKAEAALRVKKEENDILHQRLQQYESRWSEYESKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDDRDYSSDIGSHHRRQESSSSVGNYHRRQESNGFRSVGAGLNVISGLAHELDQRRQVFGDDAKFLVEVKSGQVEANLNPDQELRRLKHTFEAWKKDYAARLRETKAILSKLGSEEGAMDKVKKRWWGRRNSTRFS | 1198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju12g2035 | 1198 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 110 | 159 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | Gene3D | - | 370 | 426 | - | - | |
| Alju12g2035 | 1198 | ProSiteProfiles | IQ motif profile. | 864 | 891 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | ProSiteProfiles | IQ motif profile. | 885 | 914 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | FunFam | Myosin heavy chain | 370 | 426 | - | - | |
| Alju12g2035 | 1198 | Coils | Coil | 980 | 1028 | - | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 40 | 104 | - | - | |
| Alju12g2035 | 1198 | SMART | MYSc_2a | 157 | 861 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 1053 | 1067 | - | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 86 | 104 | - | - | |
| Alju12g2035 | 1198 | Gene3D | Kinesin motor domain | 355 | 793 | IPR036961 | - | |
| Alju12g2035 | 1198 | PANTHER | MYOSIN | 156 | 1194 | - | - | |
| Alju12g2035 | 1198 | Gene3D | - | 913 | 956 | - | - | |
| Alju12g2035 | 1198 | Gene3D | - | 864 | 912 | - | - | |
| Alju12g2035 | 1198 | Gene3D | - | 794 | 861 | - | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 40 | 54 | - | - | |
| Alju12g2035 | 1198 | Pfam | Myosin head (motor domain) | 357 | 848 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | Pfam | Myosin head (motor domain) | 165 | 329 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 427 | 535 | - | - | |
| Alju12g2035 | 1198 | Gene3D | Kinesin motor domain | 162 | 330 | IPR036961 | - | |
| Alju12g2035 | 1198 | Gene3D | - | 558 | 750 | - | - | |
| Alju12g2035 | 1198 | ProSiteProfiles | IQ motif profile. | 936 | 962 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | FunFam | Unconventional myosin-XIX | 558 | 750 | - | - | |
| Alju12g2035 | 1198 | SMART | iq_5 | 861 | 883 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | SMART | iq_5 | 910 | 932 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | SMART | iq_5 | 933 | 955 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | SMART | iq_5 | 884 | 906 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | ProSiteProfiles | Myosin motor domain profile. | 163 | 860 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | CDD | MYSc_Myo8 | 177 | 848 | IPR036022 | - | |
| Alju12g2035 | 1198 | Pfam | IQ calmodulin-binding motif | 887 | 905 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | Pfam | IQ calmodulin-binding motif | 937 | 952 | IPR000048 | GO:0005515 | |
| Alju12g2035 | 1198 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 137 | 906 | IPR027417 | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 1068 | 1084 | - | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 1053 | 1089 | - | - | |
| Alju12g2035 | 1198 | MobiDBLite | consensus disorder prediction | 63 | 77 | - | - | |
| Alju12g2035 | 1198 | PRINTS | Myosin heavy chain signature | 193 | 212 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | PRINTS | Myosin heavy chain signature | 289 | 316 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | PRINTS | Myosin heavy chain signature | 546 | 574 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | PRINTS | Myosin heavy chain signature | 247 | 272 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Alju12g2035 | 1198 | PRINTS | Myosin heavy chain signature | 599 | 627 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju12g2035 | Alju-ChrAlju12 | 41213668 | 41223961 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju12g2035 | 10 | 1197 | Myosins gene family | AT1G50360 | 73.512 | 0.0 | 1776 |