Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2029 ATGCTCACCTCCGCCGCGAATTTTGCTCGCCTTCATTCTCTTGGATCAGAGAGTGAGATATTGCCTCTCAATGAAAGACGCATAAACCCTATCGATCGCCAGCCTACACTCTTCGCCGCGCCTACTATCATCTTCCTTGCTACTGATATCGCCCACGAGCAGAGATCGACGCCGCTTCATCGTCATCTTGTTAGAGAATCTGCGGCGAGATCACAGCCAGAAATCTTTTCGTCTCCATCAATGGTTGGAAGTCTTGAAATCGGAGCTGTACCTTTCAATCCAGATGGATGGGGTCCGCCTGACGCCGCCGCGTCTTCCGCTAGCAACCTCCCGGCGAATATACCCTACGCTCCATTCTCTCGCTCAGACAAACTGGGTCGAATCGCTGACTGGACCCGCAACTTCAACAACCCTACACGACCCAAAAACCCGGCAGACGCTGCATTCGACTTCACCATCGACGATTCCTTCCCTGCCTCCGCAGATGATGATTCCTCCTTCCGCCTCGTCGATGGAAAGCCCCCTCCGCGACCCAAGTTTGGTCCCAGATGGCGGTTCCAGCAGCAGCGGCAGCTCCCTCAACGCCGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCTGAGAAGGAGAGGGCGCGCCGCGACCGTCTCTACCATCTCAATAGATCCAACGCGAATGCCTCACGTCGTGAAGCCGCGGTCTTCAAATCCTCTGTGGATATTCAACCCGAGTGGAACATGCTGGACCAGATACCATTCTCAACTTTTTCAAAGTTATCATTCGCTGTTCCTGAACCCGAAGACCTTCTTCTCTGTGGAGGGCTCGAGTATTATGACAGGTCATATGATAGGATTACTCCCAAGAACGAACGTCGTCTCGAGAGGTTTAAGAATAGGAACTTTTTCAAAGTTACTACGACTGACGACCCAGTGATCCGAAGGCTTGCTAACGAGGACAAAGCCACAGTTTTTGCCGCTGATACTATTCTTTCAACGCTCATGTGTTCACCCAGGTCTGTTTACTCATGGGATATTGTTGTTCAGCGAGTTGGGAATAAGTTGTTTTTTGATAAGAGGGATGGATCTCAGTTGGATTTGCTGTCCGTCCACGAAACCTCGCAGGAGCCATTGCCAGAGGCCAAGGATGATATTAACTCAGCCCATTCATTGAGCGTCGAGGCAGCTTATATTAATCAGAATTTCTCGCAACAAGTTTTAATTAGAGATGGGAATAAGGTGACTTTTGACGAGCCTAATCCTTTTGCAAATGAGGGTGAGGAGGTTGCTGCTGTGGCATACAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCAAGGTGTGAAGTTCAGAGTGTTGTTGATATGAACAATCAGAGGTCCTTCCTCACATTGAATGCTTTGAATGAATTTGATCCCAAATACTCTGGTGTTGATTGGAGACAGAAGTTGGAGACACAAAGGGGTGCAGTCTTAGCAACAGAGCTGAAGAATAACGCAAATAAGTTGGCTAAATGGACTGCCCAAGCTCTGTTGGCAAGTGCAGATATGATGAAGTTGGGTTACGTTTCTAGGGTTCATCCTCGTGATCATTTCAATCATGTGATTTTGGCTGTAAATGGTTATAAGCCCAGAGATTTTGCAACTCAAATTAATTTGAATACAAATAATATGTGGGGAATTGTAAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGGAAGTATGTTCTAGTGAAGGATCCATCTAAGCCCCAGGTTAGGATCTATGAGGTTCCAGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCACTGCCTGAGGAGGAACAAGTTCAACCTCCAACGGAGGGTGGCGATGGTGGTGAGGCAACTGCTACAACTAATGATGTGGAAGATAAGCAGATTGATGGTCAAGCTTAA 1932 0.4793 MLTSAANFARLHSLGSESEILPLNERRINPIDRQPTLFAAPTIIFLATDIAHEQRSTPLHRHLVRESAARSQPEIFSSPSMVGSLEIGAVPFNPDGWGPPDAAASSASNLPANIPYAPFSRSDKLGRIADWTRNFNNPTRPKNPADAAFDFTIDDSFPASADDDSSFRLVDGKPPPRPKFGPRWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANASRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFAVPEPEDLLLCGGLEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFAADTILSTLMCSPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVAAVAYRYRRWKLDDDMYLVARCEVQSVVDMNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVNGYKPRDFATQINLNTNNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPTEGGDGGEATATTNDVEDKQIDGQA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2029 643 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 89 594 IPR007783 GO:0003743|GO:0005737|GO:0005852
Alju12g2029 643 MobiDBLite consensus disorder prediction 604 643 - -
Alju12g2029 643 MobiDBLite consensus disorder prediction 190 212 - -
Alju12g2029 643 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 83 606 IPR007783 GO:0003743|GO:0005737|GO:0005852
Alju12g2029 643 Coils Coil 195 215 - -
Alju12g2029 643 PIRSF Transl_init_eIF3d 81 624 IPR007783 GO:0003743|GO:0005737|GO:0005852
Alju12g2029 643 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 84 617 IPR007783 GO:0003743|GO:0005737|GO:0005852
Alju12g2029 643 MobiDBLite consensus disorder prediction 162 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2029 Alju-ChrAlju12 41173174 41176208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g2029 84 640 Eukaryotic Initiation Factors Gene Family AT4G20980 77.873 0.0 923