LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g2023	ATGGCGCCGAAACGTGCTTCTCCTTTGGACGAACCACCCTCAGCTTCGTCTTCATCCGAGGAAGAAGAGGAAACTTCATCCGAGGCAGGTTCTTCATCTGAAGACGACGATCAACCTCCAAAACTTACACAACCCCTCTCCACTGAGAAGAGGCCCGCTGCCAAAAAGCCCCCACCTGCTGCTCCAATCAAAAAATCACAACCAAAAGCTTCAGTGTCGGAATCTGAGACAGAATCTGATGCCGGATCTGACTCCGATGATGAGCGCCCCGGTGAGAATACGGATCTGGTTGTCAAGCCTATTGCCTCCAAGCCTAAAGAAGAGACGCCTAAAGCAAATAAGTCGAAGTCTCAGCCACCCGTTTCGCCGGCCAAATCAGCGAACAAGCGACCAAGTGATAACAATCGGCCGGTCACTGACTCGAAAAAGGCGAAGGGGAAGGATGCTGCCGGAACCGATGAGGCTCCGGCGGCAGAGGATGACGGTAAAAAAGCTGGGGATGAGTCCAAGAAGCTTTTTCAGAGACTGTGGAATGAGGACGATGAGATTGCGATCCTCAATGGTTTAGCGGAATATGCAGCGAAGACAGGAGAAGCGCCGCTTAAGGATATTAATGGATTTCACGATTTCATAAAGAAGTCGCTCCACGTGGATGTTTCAAATGAACAATTGGCGAGTAAGATTCGGAGTGTGAAGAGAAAGTGTATGAAGAATGCTCAAAGAGGGAAAAATGGTGAAGGGCCTAACTTTTCAAAACCATACGATAAGAGAGTCTTTGAATTGTCGAGGAAGATCTGGGCTGATGAAGTAGCCAATTGGGGAATAGACGTTACAAAGTCGAATGGGAAAGTGAAGAAGAAAAATACGAAGGAATGTAGCAGTTTTGCGGCTTCTCAGAAACTAGTGGCTGATCTGGTTTTAGATTCCAAAGAAGCTAGAAAGGTTGACATCGATCGGAATGCAGGATCGCCACTGAGTTTAAGTGAAATGATTAGGTTCGACAATAGTCTGGGTCTGTCAGGGTTGGGTGATGATGCCATTAAAAGAGGATATGAATTGATTGGAGCTTCCAAGAAGGCAGAGTTGGAGGACAGGTGGAAGAAACTGAAAATTGCAGAATTGGAGCTGTTTGTGAAACGAGTTGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGTTACCAAATCTTCAGGCAATTAG	1203	0.4688	MAPKRASPLDEPPSASSSSEEEEETSSEAGSSSEDDDQPPKLTQPLSTEKRPAAKKPPPAAPIKKSQPKASVSESETESDAGSDSDDERPGENTDLVVKPIASKPKEETPKANKSKSQPPVSPAKSANKRPSDNNRPVTDSKKAKGKDAAGTDEAPAAEDDGKKAGDESKKLFQRLWNEDDEIAILNGLAEYAAKTGEAPLKDINGFHDFIKKSLHVDVSNEQLASKIRSVKRKCMKNAQRGKNGEGPNFSKPYDKRVFELSRKIWADEVANWGIDVTKSNGKVKKKNTKECSSFAASQKLVADLVLDSKEARKVDIDRNAGSPLSLSEMIRFDNSLGLSGLGDDAIKRGYELIGASKKAELEDRWKKLKIAELELFVKRVELVKDEASLIWEVTKSSGN	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g2023	400	MobiDBLite	consensus disorder prediction	114	134	-	-
	Alju12g2023	400	MobiDBLite	consensus disorder prediction	135	166	-	-
	Alju12g2023	400	Pfam	Protein of unknown function, DUF573	173	266	IPR007592	GO:0006355
	Alju12g2023	400	MobiDBLite	consensus disorder prediction	1	166	-	-
	Alju12g2023	400	PANTHER	BNAANNG10740D PROTEIN-RELATED	12	388	IPR007592	GO:0006355
	Alju12g2023	400	MobiDBLite	consensus disorder prediction	16	31	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g2023	Alju-ChrAlju12	41143102	41144304	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju12g2023	4	396	GeBP Transcription Factor Family	AT1G61730	31.017	3.26e-35	131

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Alju12g2023		DUF573	5.8e-30	CL0123