Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2022 ATGACTGTGGATGAAGTTGGTAGCAGCTCTGTGTGGAGCAGAGAGCAAGATAAAGCATTTGAAAATGCCCTAGCAACTCATCCTGAAGATGCACCAGATCGATGGGAGAAGATCTCAGCTGATGTACCAGGGAAAACTGTAGAAGAGATTAAACATCACTACGAGCTATTGGTTGAGGATCTTAACCAGATCGAATCTGGTTGTGTGCCTATACCTTCTTATAATTCTTCTTCAGAGGGGTCAACCAGCCATGCCAGTGATGAAGGAGGGGGCAAGAAGGGTTCTGGGCATTATAACAGTGAGTCTAATCATGGAACTAAGGCTTCAAGATCAGATCAAGAGCGACGAAAGGGTATTGCTTGGACAGAAGAGGAACACAGGTTATTTCTTCTTGGCTTGGAGAAGTATGGAAAAGGTGACTGGCGAAGCATATCAAGGCACTTTGTGGTGACAAGAACGCCTACTCAAGTAGCAAGCCATGCTCAAAAATACTTCATTCGTTTGAACTCCATGAATAAAGATAGAAGAAGATCCAGTATACATGATATCACCAGTGTGAACAATGGAGACATTTCAGCTCCTCAAGGACCAATCACCGGTCAATCAAATGGTTCTTCTACCTCCAATGCCGCTGGCAAATCAACCAAGCAAACCCCTCAAACTCCAAATGGACCTCCTGGTGTAGGAATATATGGTGCTCCAACCATTGGGCAACCTATAGGAGGACCTCTTGTCTCTGCAGTGGGCACCCCGGTAAATCTTCCTGGACCGGCTCACATGGCATATGGGGTCCGAGCACCAGTGCCCGGCACGGTAGTCCCCGGTGCCCCGATGAACATGGGCCCTATGCCATACCCTATGCCACACACATCTGCTCATAGAGATAAGTTATATTGTTGTTTGTTTTACAGCACCCCATACCTTTTCTTCATGCAGAACTAA 942 0.465 MTVDEVGSSSVWSREQDKAFENALATHPEDAPDRWEKISADVPGKTVEEIKHHYELLVEDLNQIESGCVPIPSYNSSSEGSTSHASDEGGGKKGSGHYNSESNHGTKASRSDQERRKGIAWTEEEHRLFLLGLEKYGKGDWRSISRHFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQSNGSSTSNAAGKSTKQTPQTPNGPPGVGIYGAPTIGQPIGGPLVSAVGTPVNLPGPAHMAYGVRAPVPGTVVPGAPMNMGPMPYPMPHTSAHRDKLYCCLFYSTPYLFFMQN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2022 313 MobiDBLite consensus disorder prediction 72 117 - -
Alju12g2022 313 PANTHER TRANSCRIPTION FACTOR KUA1 8 293 - -
Alju12g2022 313 MobiDBLite consensus disorder prediction 175 232 - -
Alju12g2022 313 SMART sant 8 60 IPR001005 -
Alju12g2022 313 SMART sant 117 167 IPR001005 -
Alju12g2022 313 Gene3D - 119 171 - -
Alju12g2022 313 MobiDBLite consensus disorder prediction 1 39 - -
Alju12g2022 313 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Alju12g2022 313 ProSiteProfiles Myb-like domain profile. 12 58 IPR001005 -
Alju12g2022 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 169 IPR017930 -
Alju12g2022 313 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Alju12g2022 313 CDD SANT 12 58 IPR001005 -
Alju12g2022 313 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Alju12g2022 313 Pfam Myb-like DNA-binding domain 11 54 IPR001005 -
Alju12g2022 313 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Alju12g2022 313 MobiDBLite consensus disorder prediction 182 224 - -
Alju12g2022 313 MobiDBLite consensus disorder prediction 1 16 - -
Alju12g2022 313 FunFam Transcription factor SRM1 4 71 - -
Alju12g2022 313 FunFam transcription factor MYB1R1 119 170 - -
Alju12g2022 313 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Alju12g2022 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 117 167 IPR006447 GO:0003677
Alju12g2022 313 CDD SANT 120 165 IPR001005 -
Alju12g2022 313 MobiDBLite consensus disorder prediction 20 39 - -
Alju12g2022 313 SUPERFAMILY Homeodomain-like 10 65 IPR009057 -
Alju12g2022 313 Gene3D - 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2022 Alju-ChrAlju12 41122625 41127489 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju12g2022 Myb_DNA-binding 1.2e-12 CL0123