Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1995 ATGAATCTCCACAAGCCTAAAGGTATTTTGGAGTCGGACCCTCCCTTGTCTGTCTCTCTCTCCTCTCTCCAGAAGGGCAAAACCCTAAAGAGCCGTTTACACCCACCAATTCTTATGGACGATGATGCGTTGAACATGCGCAATTGGGGTTATTATGAACCATTCAAAGGGGGGCATCTGGGTCTCCAGCTCATGTCCAGTATGACAGAACGAGACACTAAGCCATTTATGCCAGGCCGTGATCCTACTATGTTAGTTAGTCCAAATGGAGGCTTCCACCCCCGGGATTGTGTTGCTTCAGAAGCCCCAATTCCAATTAACTATGTTAGAGACAGTTGGATCAGCCAGAGAGATAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGCAGCTCCTTCCTTGCAAATTATACAGCCACCTGAAACATCGAGAGATGATAGGGTGAATCAAGTTGAAGACCCTCCTGTCAAAAAGGAAGTTGGCCAATTAAAGAAAAGGCAAAGCGGGGGCGCTGTGAAGGCTCCTAAAGCGAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTGTGGTTCAACGTGAGAAGCCAGCTAGGAAGGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCTGTTTGCTCATGCACTGGGGCTCCTCAGCAGTGTTATCGATGGGGCTGTGGCGGTTGGCAATCAGCTTGTTGTACCACGAATGTGTCAATGTATCCATTGCCGATGAGCACTAAAAGGCGTGGCGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTCAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGCTAATCCTATTGATCTGAGGACTCACTGGGCTAGGCACGGCACCAACAAGTTTGTCACTATCAGGTAA 951 0.4637 MNLHKPKGILESDPPLSVSLSSLQKGKTLKSRLHPPILMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPTMLVSPNGGFHPRDCVASEAPIPINYVRDSWISQRDRFLNMLPTNPNYAVLPETSAAPSLQIIQPPETSRDDRVNQVEDPPVKKEVGQLKKRQSGGAVKAPKAKKPRKPKDNSNAVVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1995 316 SMART GAGA_bind_2 39 316 IPR010409 -
Alju12g1995 316 MobiDBLite consensus disorder prediction 153 172 - -
Alju12g1995 316 MobiDBLite consensus disorder prediction 189 203 - -
Alju12g1995 316 Pfam GAGA binding protein-like family 39 316 IPR010409 -
Alju12g1995 316 MobiDBLite consensus disorder prediction 146 203 - -
Alju12g1995 316 PANTHER - 39 316 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1995 Alju-ChrAlju12 40918067 40920101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1995 39 316 BBR or BPC Transcription factor family AT2G01930 56.566 5.79e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Alju12g1995 GAGA_bind 2.5e-111 No_clan