Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1978 ATGGCTGTCGAATCGGGTGCTTATTCCAGTCCAACTCACAATTTTTTATTTGCGCAAAAATTTCGTCGGACTCGGCGAAGAATTTATGATTCAATGTCAGAGAAAGAAGATATTCGAGGCCCAGATTCTTCTTCAAAGAAAGGAAAGGATCTGACAATTGAGGGGTACCCTATTCAGGGTTTGTCCATTGGAGGCCAAGAAACCTGCATAATTTTCCCCTCACTTAATTTAGCTTTTGATATTGGTCGCTGCCCTGCCCGCGCTGTTTGCCAAGACTTCCTCCTAATTTCCCATTCTCACATGGATCACATTGGAGGATTGCCTATGTATGTTGCAACGAGAGGCTTGTACCGTATGAAGCCCCCAACGATTATTGTACCAGCATCTGTAAAAGAGGATGTAGAGAGGCTCTTTGAGGTGCATAGGAAATTGGATCACTCGGAATTGAAGCACAATCTGGTTGGCTTGAATGTAGGAGAAGAGTTTTATTTGAGAAACGATATTAAAGTTAAAGCTTTTAAGACTTACCATGTTATACCTAGCCAGGGCTACATACTTTACTCTGTAAAAAAGAAGCTTAAACACGAGTACCTTGGGCTTCCTGGAAATGAAATTAAGAACTTGAAGTTTTCAGGTGTGGAGATAACTTACACTTTGGAAGAACCAGAGATTGCTTTCACTGGCGACACTATGGCAGATTTCATAGTTGATGATAGTAACATTGATGCATTGCGAGCCAGGATTCTTATTATGGAGTGCACCTTTGTAAACGATTCAATTACAGTGACGCATGCCAGAGATTATGGACATACTCATCTGTCTGAGATAATCAGTTATGCTGGGAAGTTGCAAAACCGAGCAATCCTTCTAATTCACTTCTCAGCGCGCTACACAGCTGAGGAAATTCAACAAGCCATAGCTGCATTGCCTCCACCATTAGTGGGTCGAACTTATGCACTTCTAGAAGAAACATTTTGTTCTCCTTCTCTGTTGGGTCGTCACCTGCACACTATAATGGAACATAACGTTGAAGTACGAGTGAATGGAACCATTAATCCTGTTTATTTTGACTATAATTCGAGATATGAAGTATGTATAAGCAAGGGCACGTTTCGTTCCAGTTTCTTGCATGGTGTGTGGCATGGCGATAACCCATTCCACAGTGTCCTTCCTATCACCTTGCTCCAAATCTTCTTGTTCCTCATCTCCTCTAGGCTCATTTACTTGCTTCTCAGGCCTATCAGAACTCCCAATTTCGTCTGCTCGGTTCTGGCTGGGATTCTTCTAGGACCTTCAGTTATTGGGCACAACAAGAAACTGAGGAATCTACTGTTCCCGCCGGTCCAAAATGAGATCTTGCGGTTCATGGCAACAATGGCTTCCATATATTACATCTTCATAGTGATAATGAAAATGGAGGCAGTGTCCAATATTAAAAACGCCATAAAAACCTGGAGATTCGGAACAATACCCTTCCTGTCCAGTTTTTGGGTCATGTCTGGTCTCCTCTACTTCCTTGTCCCCAACGTACCTTCCCAACCGGACACCATGCAACGTGTCCGCATGTTGCTGTGCGTGACAACCTCCGTCAGCACCTTCCCCGTCGTGTCAGAAAACTTGTTCGAATTAAATCTCTTAACTTCGGAGTTAGGCCAGGTTGCCATGTCAGCAACTGCCCTCAACGAGATTGCTTATTGGGTTTTTGTAGCCGTCTCAACAGCCATCAACTTCAAGGCCAAGGGCATGAACGCATTAGGGTACATGTGTTCTTACATTGCCTTTATATGTTTCTGCGTTTTTGTGATAAAGCCAGCAATGTTGATGATTGCTAAGAGGACACCTGAGGGTATGCCAATAAGTCAAGGTTATGTCGTTTTGATACAAATTGGTGTTTTGGCTATGGGAGCATTAAGTAACCAGCTTGGCATCTCTATCCTGATTGGTCCCTTTCTTATGGGCTTGGTTATGCCCCATGGGTCCGCATTGGCCACAACTGTAGTGGACAGGACCGAGGGCATCATAACGCACTTTCTTGTGCCTTTGTTCTTCTGCTATGTAGGATTGATCATAGATGTGTATAGCCTTCATTCTTGGGGTTTGATTTTTAAGATTCAACTCGTCATAGTCGCGGGATTCGTCACCAAGTTCATAGCCTGCATGCTCATCTCACTCTCCTATAACATTAGTCTCAAACATGGCTTTGTGCTTGGCCTCATGTTGAGCTTCAAGGGCATCAACGATCTCATCATTCTCACTAAATTTAGGAGACTCAAGATAGTGGACGATCAACTTTTCGCTCACTGGGTGTTTTCGGTGATAGGGGTAACTGCGATTGCGTCACCGTTGATAGAAATGCTATATAAACCTCATACTAGAATTAAAACATATTCGATGTCACAAGGGTCAACGACGATAAGGACAATACAGAACACCCAAAGAAACTCAGAGTTGTGCATGGTGTTATGTGTGCACAAAGAAGGAGAAGTGAGAAGCATGATCTCGCTCTTGGAATCCATGAATCCATGCCATGAAAGCCCTATTTGTGTCTACGTCATCCACCTCATCGAGCTCTCAGGCCAAAGCACACCCATGCTCCGCCGTGTCGACATCACCAAGAAAAAATCCCAAACTCATAACCCTTCTACAGGCCACATCATGCGAGCCTTCGATAACTATGCCACAAACTCCGACAAGGGGTCCATCACGCCGTTACCGTACATTAACGTTGCCCCTTACAAGAGCATGCACGAGCCCGTCGTCAACTTGGCGCAAGACCGATTTGCCCCTCTCATCATCCTCCCTTTCCACCAAAACGATCAGTCCCACGTCGGAGGAGTCGCCGCCTCCATCCGCAAAGTCACCATGAACTTCCTCGCTCACGCCAAGTGCACGGTGGGGCTACTCGTCGACCGCCAGTCTCATCTGAGAGTGAGCTCCTCCGGTCTCATGTCGCTCCACATCGGAATCTTCTTCGTCGGAGGCCCTGACGATCGAGAAGCACTGGCGCTGGGCATGAGAATGGCGGAGCGACAAAACTCGAGCCTGGTGGTTTTCAGACTTGTGGATGATGATGATGAAGAGTTGGAAGAAGAGTACGAGGAGGATCGAAGGAAGGACGAGAGTTTGATAGACGAATTCAGGGCGATGAAATTCGGAAGAGGGCAAGTAGAGTACCGTGAGATAAACGTGAAGGGATTGGAGGTGTTCGAGAGGATACGGAGGTTGGAAGGAGACTATGATATGGTGATGGTGGGGAGGAAGCATACGGTGGAGATACAAATCGGCGACGAGGAAATGTTGGCGAGCTTGTTAGACAATGCAGATATGTTGGGAGTGATAGGGGATATGTTAGCGTCGAGTGAGTTCTGTGATGGCAAGGTTCCAGTTTTGGTGACACAGTGTGGTGGTGGAAACAATAATAAGGGTAAAGGCTTAGCGAGAAAGGCTTCTTCTGTAGCAGGTTCTCATTCAAGTTTTGGTTCCAGATTTTGGTAA 3495 0.4561 MAVESGAYSSPTHNFLFAQKFRRTRRRIYDSMSEKEDIRGPDSSSKKGKDLTIEGYPIQGLSIGGQETCIIFPSLNLAFDIGRCPARAVCQDFLLISHSHMDHIGGLPMYVATRGLYRMKPPTIIVPASVKEDVERLFEVHRKLDHSELKHNLVGLNVGEEFYLRNDIKVKAFKTYHVIPSQGYILYSVKKKLKHEYLGLPGNEIKNLKFSGVEITYTLEEPEIAFTGDTMADFIVDDSNIDALRARILIMECTFVNDSITVTHARDYGHTHLSEIISYAGKLQNRAILLIHFSARYTAEEIQQAIAALPPPLVGRTYALLEETFCSPSLLGRHLHTIMEHNVEVRVNGTINPVYFDYNSRYEVCISKGTFRSSFLHGVWHGDNPFHSVLPITLLQIFLFLISSRLIYLLLRPIRTPNFVCSVLAGILLGPSVIGHNKKLRNLLFPPVQNEILRFMATMASIYYIFIVIMKMEAVSNIKNAIKTWRFGTIPFLSSFWVMSGLLYFLVPNVPSQPDTMQRVRMLLCVTTSVSTFPVVSENLFELNLLTSELGQVAMSATALNEIAYWVFVAVSTAINFKAKGMNALGYMCSYIAFICFCVFVIKPAMLMIAKRTPEGMPISQGYVVLIQIGVLAMGALSNQLGISILIGPFLMGLVMPHGSALATTVVDRTEGIITHFLVPLFFCYVGLIIDVYSLHSWGLIFKIQLVIVAGFVTKFIACMLISLSYNISLKHGFVLGLMLSFKGINDLIILTKFRRLKIVDDQLFAHWVFSVIGVTAIASPLIEMLYKPHTRIKTYSMSQGSTTIRTIQNTQRNSELCMVLCVHKEGEVRSMISLLESMNPCHESPICVYVIHLIELSGQSTPMLRRVDITKKKSQTHNPSTGHIMRAFDNYATNSDKGSITPLPYINVAPYKSMHEPVVNLAQDRFAPLIILPFHQNDQSHVGGVAASIRKVTMNFLAHAKCTVGLLVDRQSHLRVSSSGLMSLHIGIFFVGGPDDREALALGMRMAERQNSSLVVFRLVDDDDEELEEEYEEDRRKDESLIDEFRAMKFGRGQVEYREINVKGLEVFERIRRLEGDYDMVMVGRKHTVEIQIGDEEMLASLLDNADMLGVIGDMLASSEFCDGKVPVLVTQCGGGNNNKGKGLARKASSVAGSHSSFGSRFW 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1978 1164 Pfam Sodium/hydrogen exchanger family 398 782 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Alju12g1978 1164 PANTHER CATION/H + ANTIPORTER 365 1133 - -
Alju12g1978 1164 Gene3D - 392 796 IPR038770 -
Alju12g1978 1164 MobiDBLite consensus disorder prediction 32 49 - -
Alju12g1978 1164 Gene3D - 57 311 IPR036866 -
Alju12g1978 1164 Pfam Beta-lactamase superfamily domain 92 293 IPR001279 -
Alju12g1978 1164 Coils Coil 1025 1045 - -
Alju12g1978 1164 SUPERFAMILY Metallo-hydrolase/oxidoreductase 72 307 IPR036866 -
Alju12g1978 1164 Gene3D - 912 1093 - -
Alju12g1978 1164 MobiDBLite consensus disorder prediction 32 51 - -
Alju12g1978 1164 CDD RNaseZ_MBL-fold 51 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1978 Alju-ChrAlju12 40780525 40789709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1978 377 1133 Antiporter Super Family AT2G13620 32.484 5.75e-121 391