Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1967 ATGATTGGAGGGAAAGATCTTCCTAATGGTCTTGACTCTGATGGGGAGAACTCTCGGAGCAAGCTGTCGAAGCCCAATTTTGACCGTGGCAGGGAGAACCCTGAAGAGAAATTAGGGTATCCAGCAAAGGGTGCGTATTTTCTGACGAATTCAGAGGACGTTGGTGATGGAATTCTGTTGAAACCCTCTAAAGTTGGGCCGTCGGGCTTTCAAGAGCTGACACTCAGCTATCTTTGTGATAAGGAGATTCATGGTAAAAGCTTGCTGAGTTCCTTGGAAAGAGTCAGCGGCAAAGGTAAAGAAGTCATCGTCTCGGAGGATTCAAATCAGGGTGGGAAATGGGTCGAACTGGATTTTCTGAATTTGAGCGAAACCAGGGAGAATTCTTCAAAGCGATCGGTTGAAGAAGACGTTGAAAGGGAAAATAAGGACAAGAAGCCGAAGCTGGAGACGCTTAATCTCTCTCTTGCCTTGCCTGATGTCTCCCTTTCTCTTACGGCGTCAAACGCCCTGCAAAACGGTGATCAGCCGGTGAGGCCAAAACCTAGCAAACCGTCCGCGACTACGTATTCAAATGATTATACAACGGCTTCTCTATCATACTCTCATTCCCATCCCTTCTCGCACAATCCTAGTTGCTCGCTTACCCGTAATTCTACAGATTTTGATTATTCCGTTAGCCGAGATGATCATATTTGGAACTGCGGAGAGGGGACGAATGGGTCAGTTCATAGTCGGTTCAAGCCGATAGGAGATGGGGTTGCCTTGTCTAATCATGGTGGTGGTGGGTTTAATCCGATCATGCAGGGTAATAATAGTCAGTATAAAACTACAAGTTCAGATAACCATTCTTTTTTTCCGTCGGAACTGCCTGCCAGGCCAAGATTTGAAGCTCGGTCAGGGGACTCGAGAGGAAGGAATTCTGAGAATCTGAGAGTATTGGAAGGTTTAGATAGTGAGAAAGTAAGGAAGCTTTCTAGACCAGAGAAAATTCTCAGAGAGATCGTGTTGGAGTCTACCCCAACCATGGCTGCTCAGTTTCAAGAGCTTACAGATGAAGCGATTGCATCGACTAAGGAGTACTTAAGGAATCTCATTGAGATACCCGAGAAGAAAGAGGAATTGGTCAGTCTCCAAAATCGGCTTGAGCGAAGATCTGACCTTACTAAGGAGACTCTTTCGAAGTGCCAAAAGGGCCAACTTGAGATTATAGTTTCTGTCAAGATGGGGCTTGCAAGCTTCTTATCTGGCAAAGTCCCCTTCTCCGAGATGGTAGAGATTTTCTTGCATATGAGATGTAGGAATGTGAATTGTAGGAACTTGCTGCCTGTTGATGACTGTGACTGCAAGATTTGTTCTGGAAACAAGGGATTTTGTAGTTCTTGCATGTGTCCTGTGTGTCTGAACTTTGATTGTGCTAGCAACACATGCAGTTGGGTTGGTTGTGATGTCTGTTCCCACTGGTGCCATGCTGCCTGCGGCATTAAGAGGAATCTTATCAAACCTGGGCCTAGCTTAAAGGGACCATCAGGGACCACTGAGATGCAGTTTCATTGCAGTGGATGTGGACATGCTTCAGAAATGTTTGGCTTTGTTAGAGACGTGTTCATGTGTTGTGCAAAGGATTGGGGTCTAGAAACCCTGGTGAAAGAGCTTGACTGTGTAAGGAGGATTTTCAAAGAAAGTGAAGATCGCAAAGGAAAGGAATTGCATGTCAAAACTGATGACATGTTCTATAAGCTGCAAACTAAAACGGTGTCTCCTTTGGATGCCTGCAATTACATCCTCCAATTTTTCAACTATGCAGATAGCATGTCAGACTTTCCTGCTTCTGGTATGTCTTCAAAGGATTTGTCAGCATCTCAAGCTAATCTTAGGAAGGAAGCAACATCTCTTTCACAATCTAATTCTCTAATGTCAAAATATACTTATAACTCGAGCTATTCAAGGTCACAATGTGATGTTCTGTCCAATGATCTTCATCAGAAAGATCTGAAAGCTTCCATCTTAAGTGAATTGAAAAATGAGAGTGATTTCCAACTGGGGGCTCTGATAAGAAAAGGTGGGCTTGATAACTTGGAGAGCATTGTGAGGATTAAGGAAGCAGAAGCCAGAATGTTCCAAACCAAGGCCGATGAAGCCCGGAGAGAAGCGGAAGGGTTCCAGAGGATGATAAGGATGAAAACGACACAGATGGAAGAAGAGTATGCCGAGAGGCTTGCCAAGCTCTCTCTTCACGAAACTGAGGAAACTCGGAGGAAGAAATTGGAGGAATTGAAGGTCTTAGAAAATTCTCAGTGTGATTACTTTAAAATGAAAATGAGGATGCAAGGTGAGATTGCTGGTTTGTTGGAGAGAATGGAGGCAACAAAGCATCAATGGGTTTAA 2388 0.4435 MIGGKDLPNGLDSDGENSRSKLSKPNFDRGRENPEEKLGYPAKGAYFLTNSEDVGDGILLKPSKVGPSGFQELTLSYLCDKEIHGKSLLSSLERVSGKGKEVIVSEDSNQGGKWVELDFLNLSETRENSSKRSVEEDVERENKDKKPKLETLNLSLALPDVSLSLTASNALQNGDQPVRPKPSKPSATTYSNDYTTASLSYSHSHPFSHNPSCSLTRNSTDFDYSVSRDDHIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGFNPIMQGNNSQYKTTSSDNHSFFPSELPARPRFEARSGDSRGRNSENLRVLEGLDSEKVRKLSRPEKILREIVLESTPTMAAQFQELTDEAIASTKEYLRNLIEIPEKKEELVSLQNRLERRSDLTKETLSKCQKGQLEIIVSVKMGLASFLSGKVPFSEMVEIFLHMRCRNVNCRNLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWVGCDVCSHWCHAACGIKRNLIKPGPSLKGPSGTTEMQFHCSGCGHASEMFGFVRDVFMCCAKDWGLETLVKELDCVRRIFKESEDRKGKELHVKTDDMFYKLQTKTVSPLDACNYILQFFNYADSMSDFPASGMSSKDLSASQANLRKEATSLSQSNSLMSKYTYNSSYSRSQCDVLSNDLHQKDLKASILSELKNESDFQLGALIRKGGLDNLESIVRIKEAEARMFQTKADEARREAEGFQRMIRMKTTQMEEEYAERLAKLSLHETEETRRKKLEELKVLENSQCDYFKMKMRMQGEIAGLLERMEATKHQWV 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1967 795 Pfam PHD - plant homeodomain finger protein 433 557 IPR032881 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 543 562 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 385 400 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 346 368 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 691 711 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 470 490 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 730 752 IPR004082 -
Alju12g1967 795 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 424 445 IPR004082 -
Alju12g1967 795 MobiDBLite consensus disorder prediction 126 146 - -
Alju12g1967 795 MobiDBLite consensus disorder prediction 169 191 - -
Alju12g1967 795 Pfam Coiled-coil region of Oberon 656 784 IPR032535 -
Alju12g1967 795 Coils Coil 745 765 - -
Alju12g1967 795 CDD PHD_OBE1_like 463 522 IPR047578 -
Alju12g1967 795 MobiDBLite consensus disorder prediction 17 38 - -
Alju12g1967 795 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 127 794 IPR004082 -
Alju12g1967 795 Coils Coil 697 717 - -
Alju12g1967 795 MobiDBLite consensus disorder prediction 128 146 - -
Alju12g1967 795 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1967 Alju-ChrAlju12 40703340 40707210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1967 364 533 PHD Gene Family AT5G57380 23.232 3.85e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1967 12 40703340 40707210 Alju12g1967 12 40703340 40707210 ECH