Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1966 ATGATGACACCAAATTTGAACTTCGAACCCGAAAATAATTCGGAAGTCAGTAGCCAAGTAGCTTCCAATATATCCTTGCAAGAAATCTCCCATGACCTTACTAAGGACAGCAACACCACTTCTTCCTGTCTCACAAACCTCACAAAACCCGAAACCGACCCGATGTCATTCTCCCTCGACTTAACACTCAACTTCAACTCCGGTGATGGCGAGTTGAAGCGCACGAGTGATGCCAGCAGTGAAGTAGGAGCTGAAGCACAACCTTCAGGATCAGCAATTCCCAGGGTCTTCTCTTGTAATTACTGTAGGAGAAAGTTCTTCAGCTCTCAGGCATTGGGAGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCGAAGCGAGCGATGCGAATGGGAATGTTCACCGAGCGGTATACAAGCCTGGCATCATTGCCTCTTCATGGTTCTGCTTTTCGGTCTCTCGGTATCGAAGCTCATGCTGCCATGCACCAAAGACACATGCCATCACTGAGGTCTCCTAACTTAAGAGCTGGTGCAAAATTTGAGAAAGATTATTTTGGACCAACCATGTTCATGGAAGATGATGATAATATGGGTCTATTTTGGCCCGGGAGTTTCCGGCAGGTGGAAGGCGGAGCCGGTCATAGCATGGGACATGAACACGCTCCAAATTCAACTACTAGTTTTGTAGCAATCACGCCGCCGCAGCCGCCGTCGCAACCACAAACATCCACATCTCCTGATCTCACTCTGAAGCTCTAA 765 0.4797 MMTPNLNFEPENNSEVSSQVASNISLQEISHDLTKDSNTTSSCLTNLTKPETDPMSFSLDLTLNFNSGDGELKRTSDASSEVGAEAQPSGSAIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGIEAHAAMHQRHMPSLRSPNLRAGAKFEKDYFGPTMFMEDDDNMGLFWPGSFRQVEGGAGHSMGHEHAPNSTTSFVAITPPQPPSQPQTSTSPDLTLKL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1966 254 MobiDBLite consensus disorder prediction 212 254 - -
Alju12g1966 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 176 IPR044246 GO:0009788
Alju12g1966 254 FunFam Zinc finger protein 2 73 143 - -
Alju12g1966 254 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g1966 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Alju12g1966 254 Gene3D Classic Zinc Finger 82 144 - -
Alju12g1966 254 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Alju12g1966 254 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1966 Alju-ChrAlju12 40695900 40696664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1966 91 254 C2H2 Transcription Factor Family AT1G66140 44.385 7.86e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju12g1966 None None None