Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1958 ATGGCTCCTAGCTTTCTCTTCCTCTGTTTCACCCTCTCCTTCCTCTCCCTAACTCATTTCTCAATTTCCCAGAATACTGTCAATTTCACTTCCTTCAATGCCTCAGATCTCCCATGGCGTCCAAACCAGAATCGCATCCTTCTCTCCCCAAATTCCAATTTCTCTGCTGGCTTCTTCCTCATTTCATCAGATCGTTACACCTTCTCCGTTTGGTTCACCAACGTCCCGCTTAACGATGACCCCGTCGTATGGTCTGCAAACTCCGGTTCGTCCCTCACCGGCCCCGCTTCCCTCGTCATCTCTTCCAAAGGCGAGCTTCTTCTCAATAATGCCCTCTTGGCAAACGCTTCGTCTGCTTCCAATTCCACGTCGCCCGTTCTCAGTCTCAGTGACGACGGTAACTTAAGTTTTGGAGTTTGGAATAGCTTCGCTGACCCAACGGACATCGTTCTCCCGAACCAAAATATCCCAGCAATTACGCTTCGTTCCCGAGATAAGCGCTTCAGATTCGTCAATTCCACGAGTCTGAATTTCAATTCCTCCCCGGATTATTACTACTCCACCCCAAGCCCGTTGCGGAGCATGGATTCCCTCGGCAAGGTGAATATGACAAATGGCGCTTTTCTTACAAGCGATTACGGCGACAATCGGCCCCGGAAAATGGTTCTCGGAAATGATGGGAATCTCAAAATCTACAGTTTCATCCCCGATCAAAAACACCCGTGGGTTGAGGTTTGGTTGGCGATTTGGGAACCGTGTAAAATCCATGGCAAATGCGGTCTTTTTGCTATATGCTTACCTTCAACTGGAATTAATGATTCGACTTCATGTGTTTGCCCGCCTGGATTCAAGCAAAATCAAGGAGGCCCTCAACAAGGTTGTGTAAGGAAAACCAAACTCACCAATAGCATCAAATTTCTGAAGCTGGATTATGTGAACTATACTAGCACCAATATGGAAAGTATGGATGCTAGAAACTCCACAATTTGTGAATCTACATGCAGAGCAAACTCACTATGTCTTGGATTTGGCTACAAATATGATGGAACTGGTTTTTGTTCTATGGTGCTGGGTGAACTCCGATATGGTTATTGGTCTCCAGGTACCGAGGCTTCGCTGTTTCTTAAGGTAGACAGATCCGAAACCGATGCCTCCAAATTCACTGGTATGACAGAAGTTTTGCAGACATCGTGCCCTGTTCGAATCAGTCTCCCACTACCCCCTAAAGATTCGAATTCCACAGCTCGAAACATTGCCATAATCTGCACACTTTTCGTTGCTGAGCTCATTTCCGGCGTCGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACTACTCTCGGTCTCGAGTTCCTTCCCGCCGGTGGCCCAAAACGGTTCTCCCATGCCGAGCTCAAAACCGCCACAAAGGACTTCTCCAATCTCATCGGAAGAGGTGGGTTCGGCGATGTTTACAAAGGAGAGCTACCAGATCATCGCGTTGTCGCCGTCAAGTGCCTCAAGAACGTCACCGGGGGCGACACCGAGTTCTGGGCAGAGGTCAACATCATTGCCAGAATGCACCACCTCAACTTGGTCCGCTTGTGGGGATTTTGCGCGGAGAGAGGTAATCGAATCTTGGTGTACGAGTACATCCCGGGCGGGTCATTGGACAAATACCTGTTCCGTCGTCCTCGGGCCGGGTCCAAAAAGGGGGAAGTATCTCCAGATTCGGACGCAAAGCCTGACTCAAATACGGCCCAAAAGCCCATCCTTGACTGGAACATCCGGTATAGGATAGCCCTGGGTGTGGCAAGATCCATAGCATACTTGCACGAAGAGTGTTTGGAATGGGTCTTACATTGTGACATCAAGCCCGAGAACATCCTACTCGGAGATGATTTCTGTCCAAAGATATCAGACTTCGGATTAGCAAAGCTAAGAAAGAAAGAGGATATGGTAACCATGTCTAGGAGGAGAGGAACTCCCGGTTATATGGCTCCGGAATGGATCACGACGGATCCAATCACGTCCAAAGCTGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGATCATTGCTGAACAGTGAAGAGTGGTATTTTCCTGGGTGGGCTTTCGATAAGATGTTCAAGGAGATGAAGCCTGAAGATATTCTGGACCGTGAGATTAAACAGTTTTATGATAGTAGGGCCCATTTTGATATGATCAATAGGATGGTGAAGACAGCCATGTGGTGCCTTCAAGATAGGCCCGATATGAGGCCCTCCATGGGCAAAGTGGCTAAAATGTTGGAGGGCACACTGGAGATTTCTGAGCCCAAGAAGCCCACTATCTTTTTCCTCGGCGGTGAATAG 2388 0.4845 MAPSFLFLCFTLSFLSLTHFSISQNTVNFTSFNASDLPWRPNQNRILLSPNSNFSAGFFLISSDRYTFSVWFTNVPLNDDPVVWSANSGSSLTGPASLVISSKGELLLNNALLANASSASNSTSPVLSLSDDGNLSFGVWNSFADPTDIVLPNQNIPAITLRSRDKRFRFVNSTSLNFNSSPDYYYSTPSPLRSMDSLGKVNMTNGAFLTSDYGDNRPRKMVLGNDGNLKIYSFIPDQKHPWVEVWLAIWEPCKIHGKCGLFAICLPSTGINDSTSCVCPPGFKQNQGGPQQGCVRKTKLTNSIKFLKLDYVNYTSTNMESMDARNSTICESTCRANSLCLGFGYKYDGTGFCSMVLGELRYGYWSPGTEASLFLKVDRSETDASKFTGMTEVLQTSCPVRISLPLPPKDSNSTARNIAIICTLFVAELISGVAFFWSFLKRYIKYRDMATTLGLEFLPAGGPKRFSHAELKTATKDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVTGGDTEFWAEVNIIARMHHLNLVRLWGFCAERGNRILVYEYIPGGSLDKYLFRRPRAGSKKGEVSPDSDAKPDSNTAQKPILDWNIRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSLLNSEEWYFPGWAFDKMFKEMKPEDILDREIKQFYDSRAHFDMINRMVKTAMWCLQDRPDMRPSMGKVAKMLEGTLEISEPKKPTIFFLGGE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1958 795 ProSiteProfiles PAN/Apple domain profile. 294 378 IPR003609 -
Alju12g1958 795 Pfam Protein kinase domain 480 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1958 795 SMART blect_4 42 146 IPR001480 -
Alju12g1958 795 Pfam S-locus glycoprotein domain 201 286 IPR000858 GO:0048544
Alju12g1958 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 157 IPR036426 -
Alju12g1958 795 CDD EGF 252 283 - -
Alju12g1958 795 SUPERFAMILY Protein kinase-like (PK-like) 458 776 IPR011009 -
Alju12g1958 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Alju12g1958 795 Gene3D Transferase(Phosphotransferase) domain 1 553 787 - -
Alju12g1958 795 ProSiteProfiles Protein kinase domain profile. 476 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1958 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Alju12g1958 795 CDD STKc_IRAK 482 777 - -
Alju12g1958 795 ProSitePatterns Protein kinases ATP-binding region signature. 482 504 IPR017441 GO:0005524
Alju12g1958 795 ProSiteProfiles Bulb-type lectin domain profile. 32 183 IPR001480 -
Alju12g1958 795 FunFam S-receptor-like serine/threonine-protein kinase 448 550 - -
Alju12g1958 795 Gene3D - 40 144 IPR036426 -
Alju12g1958 795 Gene3D Phosphorylase Kinase; domain 1 451 550 - -
Alju12g1958 795 FunFam Serine/threonine-protein kinase 551 786 - -
Alju12g1958 795 SMART serkin_6 476 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1958 795 PANTHER OS07G0415500 PROTEIN 5 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1958 Alju-ChrAlju12 40581032 40583419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1958 388 789 Receptor kinase-like Gene Family AT4G18250 35.492 6.58e-73 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju12g1958 Pkinase 1e-44 CL0016