Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1928 ATGTCGTCGGAAAGTTCTCCCACGTCTGCGGCTGAGCCCCACGCGCCTCTCCTTCGTTCCCGCCAGGGATCCTCTGATGCACCCAGGACTCCTACCCTCGCGCTCCTTCTCGGCCGTGCAGTCGGCCGTCGGGGACCCTCCATGCTGGTGCGGGAGACGGCAGCTCGCGAGCTGGAAGAGAGGAGGGCCGATTGGGGATACTCGAAGCCTGTTGTGGTTCTTGACATCTCGTGGAATATGGCCTTTGTGGTGGTGTCAGTTGTGATGCTTCTTTTGACGACCAACGAGAAGCCTAACACGCCGATCCGGGTCTGGATCTGCGGGTACGCACTGCAGTGCTTGGTTCATGTGGTTCTCGTGTGGCTCGAGTATAGGAGGAGGGCTAGGAGGGTTTCGCGGATGCGGAGGGCTCAGGACGGTGATATTGAAGCTCGTAATATTGAGGACATCAACGACAGTGAGGATGATGAAGCTGGAGATGGGAGTTCATTGAATTCGTCTCGCTCCGGATTCACGAAACGATGTGAATCGGTGAATACCATGGTTTCTTTCCTTTGGTGGATAGTTGGTTTTTATTGGGTGATCTCAGGTGGTGACGCTCTTCTGCAAGATGCTCCGCGTTTATATTGGCTGGCTGTTGTTTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGCGTTGTTTTGGCCTGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCATGCATCATTGCTATTCTCTACGCAGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTTAGTCTACTTCCGAAATATAAATTTCGCATGTTAAACAATGAGGAAAAGCCTACTGGTGGAGCAGGATCGATGGTTCCTATAGAAACAAGTAGTGGGTACCTGGCAAATGAAAGAATACTTCTACCTGAAGATGCGGAATGCTGCATATGTCTCACTTCATACGAGGATGGAGCAGAACTCAATGCTCTACCATGCAACCATCATTTCCATTCTCCATGCATTGTGAAATGGTTGAAAATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTTAAGGGAAATGAACAGTCAGTTGTTGTCAAGGAACAACTGACGTTCTCTTTGATTGCTGGACTTTGCTGCCAACGTCTGCTTCTGTAG 1149 0.497 MSSESSPTSAAEPHAPLLRSRQGSSDAPRTPTLALLLGRAVGRRGPSMLVRETAARELEERRADWGYSKPVVVLDISWNMAFVVVSVVMLLLTTNEKPNTPIRVWICGYALQCLVHVVLVWLEYRRRARRVSRMRRAQDGDIEARNIEDINDSEDDEAGDGSSLNSSRSGFTKRCESVNTMVSFLWWIVGFYWVISGGDALLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSLLPKYKFRMLNNEEKPTGGAGSMVPIETSSGYLANERILLPEDAECCICLTSYEDGAELNALPCNHHFHSPCIVKWLKMNATCPLCKYNILKGNEQSVVVKEQLTFSLIAGLCCQRLLL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1928 382 SUPERFAMILY RING/U-box 297 355 - -
Alju12g1928 382 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Alju12g1928 382 PANTHER TARGET OF ERK KINASE MPK-1 40 358 - -
Alju12g1928 382 Pfam Ring finger domain 308 350 IPR001841 -
Alju12g1928 382 MobiDBLite consensus disorder prediction 1 29 - -
Alju12g1928 382 FunFam E3 ubiquitin protein ligase RIE1 289 357 - -
Alju12g1928 382 SMART ring_2 309 349 IPR001841 -
Alju12g1928 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 359 IPR013083 -
Alju12g1928 382 CDD RING-H2_PA-TM-RING 308 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1928 Alju-ChrAlju12 40319592 40324002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1928 1 359 C3H Transcription Factor Family AT1G68070 68.802 0.0 510