Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1923 ATGTCGTCGGAAAGTTCTCCCACGTCTGCGGCTGAGCCCCACGCGCCTCTCCTTCGTTCCCGCCAGGGATCCTCTGATGCACCCAGGACTCCTACCCTCGCGCTCCTTCTCGGCCGTGCAGTCGGCCGTCGGGGACCCTCCATGCTGGTGCGGGAGACGGCAGCTCGCGAGCTGGAAGAGAGGAGGGCCGATTGGGGATACTCGAAGCCTGTTGTGGTTCTTGACATCTCGTGGAATATGGCCTTTGTGGTGGTGTCAGTTGTGATGCTTCTTTTGACGACCAACGAGAAGCCTAACACGCCGATCCGGGTCTGGATCTGCGGGTACGCACTGCAGTGCTTGGTTCATGTGGTTCTCGTGTGGCTCGAGTATAGGAGGAGGGCTAGGAGGGTTTCGCGGATGCGGAGGGCTCAGGACGGTGATATTGAAGCTCGTAATATTGAGGACATCAACGACAGTGAGGATGATGAAGCTGGAGATGGGAGTTCATTGAATTCGTCTCGCTCCGGATTCACGAAACGATGTGAATCGGTGAATACCATGGTTTCTTTCCTTTGGTGGATAGTTGGTTTTTATTGGGTGATCTCAGGTGGTGACGCTCTTCTGCAAGATGCTCCGCGTTTATATTGGCTGGCTGTTGTTTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGCGTTGTTTTGGCCTGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCATGCATCATTGCTATTCTCTACGCAGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTTAGTCTACTTCCGAAATATAAATTTCGCATGTTAAACAATGAGGAAAAGCCTACTGGTGGAGCAGGATCGATGGTTCCTATAGAAACAAGTAGTGGGTACCTGGCAAATGAAAGAATACTTCTACCTGAAGATGCGGAATGCTGCATATGTCTCACTTCATACGAGGATGGAGCAGAACTCAATGCTCTACCATGCAACCATCATTTCCATTCTCCATGCATTGTGAAATGGTTGAAAATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTTAAGGGAAATGAACAGCTATATATATTTGTATATCTATACACTCTGGATTTGAGATCTGGCGTTGGGATCCTTGGAAGTAAGAGCATTTGGATGCGAGAGTGA 1164 0.4914 MSSESSPTSAAEPHAPLLRSRQGSSDAPRTPTLALLLGRAVGRRGPSMLVRETAARELEERRADWGYSKPVVVLDISWNMAFVVVSVVMLLLTTNEKPNTPIRVWICGYALQCLVHVVLVWLEYRRRARRVSRMRRAQDGDIEARNIEDINDSEDDEAGDGSSLNSSRSGFTKRCESVNTMVSFLWWIVGFYWVISGGDALLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSLLPKYKFRMLNNEEKPTGGAGSMVPIETSSGYLANERILLPEDAECCICLTSYEDGAELNALPCNHHFHSPCIVKWLKMNATCPLCKYNILKGNEQLYIFVYLYTLDLRSGVGILGSKSIWMRE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1923 387 SUPERFAMILY RING/U-box 297 355 - -
Alju12g1923 387 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Alju12g1923 387 FunFam E3 ubiquitin protein ligase RIE1 289 357 - -
Alju12g1923 387 Pfam Ring finger domain 308 350 IPR001841 -
Alju12g1923 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 358 IPR013083 -
Alju12g1923 387 MobiDBLite consensus disorder prediction 1 29 - -
Alju12g1923 387 PANTHER TARGET OF ERK KINASE MPK-1 40 358 - -
Alju12g1923 387 SMART ring_2 309 349 IPR001841 -
Alju12g1923 387 CDD RING-H2_PA-TM-RING 308 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1923 Alju-ChrAlju12 40257446 40264108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1923 1 359 C3H Transcription Factor Family AT1G68070 68.802 0.0 509