Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1909 ATGCATCTAAAGGAGAAGGAGCACAAGATAAGCCTTGCCAAGCTGTATGCTACTATATACGTTAAGACAACTGCCTTGCGAGACGCCTTGGGGTTTATGGGAGATAGCTCGTATAGTATGGCAAATCAGAGTCTTTTGAAATTTGATATGTGCCCTGCTGCTGTGAGCATTTTGCGCGTAAGAACATCTGTGTGTCAACGCTGTCTAAACTGTAGCGCCCTGCTACCTTACAAAGTGTTGTTGCAAATAATACGAACTTTTCTTGGTCTTCGTACTCTTGCTCCTTCTTTCGTTTTCATTTTCTCTTCATTATCTCCTGAAGCAAATATCAATATTCTCCCTTCCTTATTTATTCAATCGAATCTCCACCATTTCATCAATCTTTCTGATTTCTTTTGGCTGATCATTATAGCGTGTGTGGAAATGGGTGACATGAAGGATAAGTTAAAGGGTTTCATGAAGAAAGTCTCTCAATCACCCTCTGGTAAATTCAAGGGTCAAGGAAGAGTTCTTGGATCATCCTCTACCCCATCTTCATCTTCTGCATCCGGTAATTCTATTCTTCTCCGTCCTACGCAGAATTCGGGTCCAAAACCAAGTTCTGCATCGGCGAACTCTCGACCGTTGCCCCAGAAAACGATCGATTTGGAGTCGAATAGGAAAGAAGGTTCGAGTAAGTCCAATCCTGATCCCAAACCGGTGAGCGGGTTTGACCCTTATGATTCATTGATAACTACTGGGAAGAGATCTAAAAATGGGTTTTCTTTGAATGTGTATGAATGTCCCATTTGTGGGCGATCGTTTAGGTCCGAGGAAGAGGTGTCTATACATGTGGATACCTGCGAGGGTGGCCCAGTTGAGGGTGATGAAGGAAATTGTATTTCACAATTATCTGATAATGGAGTTCAGTTAAATGGTGAATTGGAGGCTTGCATCGGTACGTATATGTCAGGGAAGCCATCTGAGGGTTCGGTCGAAGTTGTTCTGAAACTGCTGAGGAATATTGTGAAGGAACCAGATAACGCAAAGTATAGGAAAATTAGGTTCACTAATCCAAAGATAAAAGAGGCTGTTAGTGAGGTTGCAGGAGGAATTGAGCTTCTGAGCTTTGTAGGATTTGAACTAAAGGATGAGGAGGGAGAGAGATGGGCAGTGATGGAAGTTCCTACTGAAGAGCAAATAAAATTGATTAAGAAAGCAATAGCATTATTAGAATCACCAGTACTGCAAGAACCTGTAAAGAGAGACAATTTGGCATCTGAAACATGTATTGAGATGGATGAAGAGGCAGAACCTAAAAAGGTGGACAGACAGGTGAAGGTCTTCTTTGCTGCACCAGAAAGCATTGCTTCAAAGATTCAGCTACCAGATTCGTTCTATAACCTTTCAATTGACGAGGTGAAAAGGGAAGCTGAATTAAGGAGGAAAAAAATTGCAGATTCTCAGCTTTTAGTCCCCAAGTCACTAAAAGAAAAGCAAGCAAAAACTGCTAGGAGGAGATACAGAAAAGCTATGATTCGAATCCAGTTTCCAGATGGAGTGATGCTTCAAGGTGTATTTAATCCATGGGAACCGACAATTGCTTTATATGAGTTTGCCAGCTCCGCATTGAAAGAACCATGTCTGGAATTTGACCTAATGCATCCTGTACTTGTTCAACGACGGGTTATCCCTCATTTCCCAAGAGCAGGAGAGAAAGCTGTTACACTAGAGGATGAGGACCTGGTGCCTTCAGCTCTCATTAAGTTGAAACCTCATGAAACAGATTCTGTTGTTTACACTGGCCTCAGAAATGAATTGCTCGAAATCAGTGAACCCCTCATAAGTGACTGA 1833 0.4212 MHLKEKEHKISLAKLYATIYVKTTALRDALGFMGDSSYSMANQSLLKFDMCPAAVSILRVRTSVCQRCLNCSALLPYKVLLQIIRTFLGLRTLAPSFVFIFSSLSPEANINILPSLFIQSNLHHFINLSDFFWLIIIACVEMGDMKDKLKGFMKKVSQSPSGKFKGQGRVLGSSSTPSSSSASGNSILLRPTQNSGPKPSSASANSRPLPQKTIDLESNRKEGSSKSNPDPKPVSGFDPYDSLITTGKRSKNGFSLNVYECPICGRSFRSEEEVSIHVDTCEGGPVEGDEGNCISQLSDNGVQLNGELEACIGTYMSGKPSEGSVEVVLKLLRNIVKEPDNAKYRKIRFTNPKIKEAVSEVAGGIELLSFVGFELKDEEGERWAVMEVPTEEQIKLIKKAIALLESPVLQEPVKRDNLASETCIEMDEEAEPKKVDRQVKVFFAAPESIASKIQLPDSFYNLSIDEVKREAELRRKKIADSQLLVPKSLKEKQAKTARRRYRKAMIRIQFPDGVMLQGVFNPWEPTIALYEFASSALKEPCLEFDLMHPVLVQRRVIPHFPRAGEKAVTLEDEDLVPSALIKLKPHETDSVVYTGLRNELLEISEPLISD 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1909 610 ProSiteProfiles Zinc finger C2H2 type domain profile. 259 277 IPR013087 -
Alju12g1909 610 Gene3D - 317 405 - -
Alju12g1909 610 FunFam UBX domain-containing protein 6 493 584 - -
Alju12g1909 610 SUPERFAMILY Ubiquitin-like 471 583 IPR029071 -
Alju12g1909 610 ProSiteProfiles UBX domain profile. 499 583 IPR001012 GO:0005515
Alju12g1909 610 Gene3D - 493 586 - -
Alju12g1909 610 Pfam PUB domain 322 397 IPR018997 -
Alju12g1909 610 MobiDBLite consensus disorder prediction 160 213 - -
Alju12g1909 610 SUPERFAMILY PUG domain-like 322 405 IPR036339 -
Alju12g1909 610 CDD PUB 317 406 - -
Alju12g1909 610 SMART PGNneu 323 390 - -
Alju12g1909 610 MobiDBLite consensus disorder prediction 157 241 - -
Alju12g1909 610 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 142 608 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1909 142 531 C2H2 Transcription Factor Family AT2G01650 54.545 5.23e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju12g1909 PUB 6.3e-19 No_clan