Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1908 ATGGAGAGGGATTTCTTGGGTCTAAGCTCAAAAGAACCATTAGCTATGGTGAAGGAGGAGATTAACAATGATGGATGCAAAGATTCAGGCTTCACTAAGGGTTCAGCTGTACAATGGCCCTTCTCCAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGAAGATGGGGTCTGATCCTCTCACATCTGCTGGATTTATGGCTGATGCAATTGATGTTGCACAAAAACGCTCTGCTGCTGAAATCCAGAAACCTTTCAATCACGATGTGCAAAGTGGTTTTCATTTTTCCCTGGCTCCGTATCCTGTGCCAAATGATGTGCTTTCGCTGAATCGTCCTCAAGATGTGAAGATGTTTTCGGCTCCCAATCAAGCAATTCCTGTTTCCATGGGACACCCTTTCTTGAAGAACCATTTCACCACCGCGGGTCAGAATATGGCTGGTAATAATGTGAAGCAACAGCTGCTTGGGGGTATACCTGTTTCCTTGCCTCATTTAGTACCCACTACCATCGGTTCTGTTCCTGCAATGACTGAATCATGTTTGAAGCCATCTGCACCTCCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCACCCCTGAGAAGGCACAAGCTATCATGCTGTTGGCTGCGAATGGGCTACCAGTGACTTCTAACAAGGCACAGCCAAACATTCAGGCACCAAACTCAAAGTTGACTTCAGGTGAAGGTGTCCCTGTGAGTCAACCCATAAATACATTGCCTTGTCCTAGTCTTTCCAGTCCTCTATCTGTGTCTTCACATACGGGTACACAGTCAAGGAGTGGCTCAACCAGCTCTGATGAGCTTCTGGCAGCTAAAACAACCGGAGTTTCCACTACTCCTTTTAGCAAAGTGGAGCCTCCAAAAGTAGTTAACGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGCAAAGCATCATTGGCACGATTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCCGCAGCACCATATAACCTGAGCAAGAAAGCCGAGGATGTTGCTAATATCTCTGCAACTACTTCTGCTGCTTCTAGTATTATATCAGCCAAGCAAGCATAG 1137 0.4573 MERDFLGLSSKEPLAMVKEEINNDGCKDSGFTKGSAVQWPFSNKVSALPHLMSFKVSQDDKTKKMGSDPLTSAGFMADAIDVAQKRSAAEIQKPFNHDVQSGFHFSLAPYPVPNDVLSLNRPQDVKMFSAPNQAIPVSMGHPFLKNHFTTAGQNMAGNNVKQQLLGGIPVSLPHLVPTTIGSVPAMTESCLKPSAPPSQLTIFYAGTVNVFDDITPEKAQAIMLLAANGLPVTSNKAQPNIQAPNSKLTSGEGVPVSQPINTLPCPSLSSPLSVSSHTGTQSRSGSTSSDELLAAKTTGVSTTPFSKVEPPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKAEDVANISATTSAASSIISAKQA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1908 378 ProSiteProfiles Tify domain profile. 193 228 IPR010399 -
Alju12g1908 378 MobiDBLite consensus disorder prediction 237 292 - -
Alju12g1908 378 Pfam tify domain 195 227 IPR010399 -
Alju12g1908 378 SMART tify_2 193 228 IPR010399 -
Alju12g1908 378 Pfam Jas motif 325 350 IPR018467 -
Alju12g1908 378 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 357 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1908 Alju-ChrAlju12 40109828 40113003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1908 37 356 Tify Gene Family AT3G17860 35.965 1.21e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju12g1908 tify 3.2e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1908 12 40109828 40113003 Alju12g1908 12 40109828 40113003 ECH