Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1891 ATGGACAAGCCTGTCTTCTTGAACTGTTCCATAGCTTCCATATTGTCTCTCATCATTATTCTCTCCTTCATGGCTTTGCATGCCACCGAAGCTAATTCATTTTCTTGCCTCCATACTCCATACCCTCATGTCTGCAACCACTACATGACCACTAATACACTCTCAACTTCTTCTTCCTCCTTTCATGATTTGGCTCTTAAGGTCACTTTGGACCAAGCCATTGAAGCCCACCAGCTAGTCTCAACAATGAAACTGGACAAGCGTTTCACAGACAAGCGAGCCAAGCTGGCCTGGACTGATTGCTTAGAGCTCTATGAAGACACGGTTCACCAGCTGAACCGAACCTTTACGAGCTCCAAAAATCTCAACGATAGGCTCACCTGGTTAAGTGCCTCCATTGCGAATCACCAAACTTGCCAACATGGCTTCCTTGACTTCAACCTCCATGCGCACCTCAACTTCTTCCCAAATATGCTCACTAACTTCTCCAAACTGATCAGCAATTCCTTAGCCATTACCAGTGCCATGTCCACAACTCAAATTGATAATAATAATAATAAAAATAATAATGGTGGGAGAAAGTTGTTGTTTGAAGGATTATTCTTCCCCAACTGGGTTTCGATGTCGGATAGGAGGCTTCTTGCCTGGGAGGTGGCGCCGGCGGCGGATGTGGTGGTGGCGAAAGATGGGAGTGGGAACTATAAGACGATAACGGAGGGGGTGGAGGCGGCGAGTAAGATGAGTGGCGGCGGAGGGAGGAGGGTGGTGGTGCACGTAAAAGGGGGAGTGTATGAAGAGAACGTGGTGATAAAGAGGGGAACGAAGAATGTGATGATCGTTGGAGATGGGATTGGTGTTACCGTTGTTTCTGGGAGCAAGAGTGCTCAAGAAACCACCACTTTTAGTTCTGCTACTTTTGCTGTTTCTGGAGACAACTTCATGGCCCGAGATATATCCTTCGAGAACACCGCCGGGCCTGGGAGTCACCAGGCGGTGGCTTTTCGCTCCGGCGCCGACCACTCTGTGTTCTACCGGTGCAGCTTCAAGGGCTACCAAGACACTCTTTACGTCTACGCACAGCGCCAATTCTACCGTGACTGTGACGTCTACGGCACCGTTGACTTCATCTTCGGCGACGCTGTGGCTATATTCCAGAACTGCAACATCTATGTGAGAAGGCCGATGAGCAACCAGCAGAACACGGTGACGGCGCAGGCGAGATCCGACCCGAACGAGAACACCGGCATTATCCTCCACGGCTGCAGCGTGACGGCGTCGTCGGACTTGAGGTCGGTGCAGGGCTCGTTCAAGACCTTTCTTGGCCGGCCCTGGAAGGAGTACTCGAGGACGGTGGTCATGAAGAGCAACCTCGACGGGCTGATCAACCCGGCGGGTTGGATGCCCTGGAGTGGGAGCTTCGCCCTGAAGACTCTATATTACGGCGAATATATGAACACCGGAAGCGGAGCCGCCACAGGTGGGAGGGTGAAATGGCCAGGGTTTCACGTGATCACGAGTCCAGTGGAGGCCGGAAAGTTCACGGTCGGGAACTTTCTAGCCGGCCAGTCGTGGATTTCCAGCGCCGGCGTACCATTTGACGCCGGGTTGTGA 1611 0.5214 MDKPVFLNCSIASILSLIIILSFMALHATEANSFSCLHTPYPHVCNHYMTTNTLSTSSSSFHDLALKVTLDQAIEAHQLVSTMKLDKRFTDKRAKLAWTDCLELYEDTVHQLNRTFTSSKNLNDRLTWLSASIANHQTCQHGFLDFNLHAHLNFFPNMLTNFSKLISNSLAITSAMSTTQIDNNNNKNNNGGRKLLFEGLFFPNWVSMSDRRLLAWEVAPAADVVVAKDGSGNYKTITEGVEAASKMSGGGGRRVVVHVKGGVYEENVVIKRGTKNVMIVGDGIGVTVVSGSKSAQETTTFSSATFAVSGDNFMARDISFENTAGPGSHQAVAFRSGADHSVFYRCSFKGYQDTLYVYAQRQFYRDCDVYGTVDFIFGDAVAIFQNCNIYVRRPMSNQQNTVTAQARSDPNENTGIILHGCSVTASSDLRSVQGSFKTFLGRPWKEYSRTVVMKSNLDGLINPAGWMPWSGSFALKTLYYGEYMNTGSGAATGGRVKWPGFHVITSPVEAGKFTVGNFLAGQSWISSAGVPFDAGL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1891 536 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Alju12g1891 536 SMART PMEI_2 26 172 IPR006501 GO:0004857
Alju12g1891 536 Pfam Plant invertase/pectin methylesterase inhibitor 35 172 IPR006501 GO:0004857
Alju12g1891 536 SUPERFAMILY Pectin lyase-like 218 535 IPR011050 -
Alju12g1891 536 FunFam Pectinesterase 217 536 - -
Alju12g1891 536 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 177 IPR035513 -
Alju12g1891 536 Pfam Pectinesterase 223 521 IPR000070 GO:0030599|GO:0042545
Alju12g1891 536 NCBIfam pectinesterase inhibitor domain 13 174 IPR006501 GO:0004857
Alju12g1891 536 Gene3D - 218 536 IPR012334 -
Alju12g1891 536 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 176 IPR035513 -
Alju12g1891 536 CDD PMEI-like_3 35 178 - -
Alju12g1891 536 PANTHER PECTINESTERASE 19 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1891 Alju-ChrAlju12 39977326 39979865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1891 3 536 Carbohydrate Esterase AT1G23200 50.802 0.0 538