LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g1887	ATGAACACGCTTCCATTTCGTTTTTCCAGATTTTATTTTTGTTCTCTACACATTACAAACCCTTTTCTTCCTCTTCTTCGTATCCAATTGTACCTTTCCCTGCTCCAACTCTCATTTCCCCCCGGTAAATCAATTTCAGAGCGCGCGGAGATTACTATTCTGATTAGTGGGATTCCTCTGCTTTTTGTTTTGTTTCATGGGCTGGTTTTGGGAGCCACAAGCACCATGACCAAATCTCATAGTTTTCTTCATAATCTGATTAAACCCTTCAAATTCGGTTCTAGTAAAGAGGGAAGCAGCGAAGAAGAGTTAGAGAGAATTGCTGCCCAGGAGCAAAAAATCTTTACCTATGAAACCTTACTTGCTGCTACCAAAAATTTTCATTCTCATCATAAGCTTGGAGAGGGAGGTTTTGGACCCGTCTACAAGGGGACGTTGGACGATGGAAGAGAGATTGCGGTAAAGAAGTTATCCCAAAGCTCAAATCAAGGGAACAAAGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGCACAGAGAAGCTACTTGTGTATGAGTATGTTCCTCATGAGAGCCTTGACAAACTTTTATTCAAATCTCACAGAAGAGAGCAGCTAGATTGGAAAAGGAGGTTTGACATAATCACAGGCATAGCAAGGGGCTTACTTTATCTTCATGAAGACTCGCATAGCTGCATCATCCACCGAGACATCAAGGCCAGTAATATCTTGCTCGATGACAAATGGATGCCTAAGATTGCGGACTTTGGCATGGCTCGCCTCTTTCCAGAGGACCAAACTCATGTCAATACACGGGTGGCTGGGACAAATGGATATATGGCTCCAGAGTATGTGATGCATGGACATTTATCGGTGAAGGCAGATGTGTTCAGCTATGGTGTTTTGGTGCTGGAGTTGATAAGTGGCCAAAGGAATTCAATGTTTAGCCTTGAGGTGGATGCACACAGTCTTCTTGATTGGTCATACAAGCTTTACAAGAAAGGGAGGAGCATAGAAATGGTTGACCCCGCATTAGCAGCTTCAGCAGTAGAAGATCAAGTAACAATGTGCATACAGCTGGGTCTGCTGTGTGTTCAAGGGGATCCGCAGCTCCGGCCAAGCATGCGACGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGTCACATGGACGAGCCGACTAGACCAGGAGCTCCTGGTTCCAGATACAGAAGACCTCGCAGGCCATCTCCATTTTCTACTGCAGCTGGTACTTCTGGTGCTGACTCTGATTCTAGGACTTCAGACTCAAGCAGCAACTATACCACCACCGCAACAACACCCAGAACAAGCTCCACCGCTCGAGAAATTGACAGTCGGGGGAAACGTCCCATGCATGAGGCTTAG	1428	0.4608	MNTLPFRFSRFYFCSLHITNPFLPLLRIQLYLSLLQLSFPPGKSISERAEITILISGIPLLFVLFHGLVLGATSTMTKSHSFLHNLIKPFKFGSSKEGSSEEELERIAAQEQKIFTYETLLAATKNFHSHHKLGEGGFGPVYKGTLDDGREIAVKKLSQSSNQGNKEFMNEAKLLARVQHRNVVNLLGYCVHGTEKLLVYEYVPHESLDKLLFKSHRREQLDWKRRFDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSYGVLVLELISGQRNSMFSLEVDAHSLLDWSYKLYKKGRSIEMVDPALAASAVEDQVTMCIQLGLLCVQGDPQLRPSMRRVVVMLSKKPGHMDEPTRPGAPGSRYRRPRRPSPFSTAAGTSGADSDSRTSDSSSNYTTTATTPRTSSTAREIDSRGKRPMHEA	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g1887	475	CDD	STKc_IRAK	133	399	-	-
	Alju12g1887	475	MobiDBLite	consensus disorder prediction	426	461	-	-
	Alju12g1887	475	SMART	serkin_6	127	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju12g1887	475	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	248	260	IPR008271	GO:0004672\|GO:0006468
	Alju12g1887	475	ProSiteProfiles	Protein kinase domain profile.	127	406	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju12g1887	475	Gene3D	Transferase(Phosphotransferase) domain 1	203	407	-	-
	Alju12g1887	475	MobiDBLite	consensus disorder prediction	397	475	-	-
	Alju12g1887	475	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	43	452	-	-
	Alju12g1887	475	FunFam	Cysteine-rich receptor-like protein kinase 10	204	409	-	-
	Alju12g1887	475	Gene3D	Phosphorylase Kinase; domain 1	91	202	-	-
	Alju12g1887	475	SUPERFAMILY	Protein kinase-like (PK-like)	112	409	IPR011009	-
	Alju12g1887	475	FunFam	Cysteine-rich receptor-like protein kinase 10	91	202	-	-
	Alju12g1887	475	Pfam	Protein tyrosine and serine/threonine kinase	129	396	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g1887	Alju-ChrAlju12	39952459	39956615	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju12g1887	117	413	Receptor kinase-like Gene Family	AT4G23230	51.342	1.18e-108	333

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju12g1887		PK_Tyr_Ser-Thr	5.4e-51	CL0016