Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1883 ATGTTTGCCTCAACGATCCTAATACCGTCTAAACTGAAAACTCGGCATTTCGTGTTAGTCCCACCAAACACCAGCATAGAAATATTCCCAACTGGAAGCAGAAGAACATACCGGAGAAGCAGAGTGTCAGCTTATTCTAAATTAGTCCATCAGAGTTTCCGTCTTTACCTGAAATCGAACATTAGACCTATAGTGGCCTCGAGGGTCAGTAATGGCGATGATGGCGCGTTTGATGCTACCCCACAACAGTCTTCCCCTCATCCTTCTGACATCGAAGAAGTGAAGAGTACCTCTTCTGGCCTCAGTGACGGTTATGTGGCCTTGTTTGTTCGAATGTTGGGCTTAGATCATGATCTTCTTGATAGGGAACAGGCTATAATTGCTCTGTGGAAATATTCACTTGGCGGAAAGCAGTGTGTTGATACTTTAATTCGATTTCCTGGCTGTATCAATCTAACTGTGAACCTCCTTAGATCAGATTCTAGTTTAGCATGTGAAGCAGCTGCAGGCCTTTTGCGATCTCTATCTTCAGTCAATCTATACAGGAATTCGGTAGCAAAGAGTGGAGCAATAGAAGAGATAAATAGACTGCTGAGGCAGTCTTCCTTGGCTCCTGAGGTAAAGGAGCAGAGTTTGAGTACATTGTGGAATTTATCTGTGGATGAGAAGCTCCGCATTAAACTTGCAAATAGTGATTCCCTACCATTGATTATTAAGTACCTTGAAGACGAGGATGTAAAAGTGAAGGAAGCTGCTGGAGGCATATTGGCAAATTTAGCTTTGAGCCATGTTAACCACAGCATTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTGACCCTGAAGGATCCAAAATCATTAAAAAGGAAGCAAAAAATGCGTTGCTGGAATTTGTTAAGGATGAATATTATAAAATTCTTGTTGTTGAGGAAGGTCTGGTTCCTGTGCCACTGATTGGTGATGAGGCATACAAGTCATTCTCCCTTGATCTGCATTCATGGCCCAAATTTCCAGATGGTACAGAGATTGAACGGGGTTCTCCAAAAACTTCCAGGTATGGTGCATCAGAATTACTTCTTGGACTTAATATCGATGATAAGATCACTAACATAGAGGAGGAAAAAATTAATGCGATTGAGGGACAAGCACAACAACGGTTCCTTGCTCGTATTGGAGCTATAGAATGGGAAGGCAAAGGTGCATCTGATTCTGAAAGCTCTGATAGGCAGCAACTTACACTTTTACCTTGGAAGTATGGCGTTGCTCGCTTGGCACTTATTCTAGAACTAGAAGATATGTCTTCCATAAAAAGGGCTGCAGAGTCAATAGCTGATGTATCTATCAATGAACGTATGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAAGCATTTAGTTCGGCTTTTGAATTGTGATGCTGCTGCTGTCCGATTGGCTGTAACTCAAGCTTTGGAGCGGCTGTCCGCCAGCAATGGAGTCTGCCAGCATATTGAATCTGAGGGAGTGTTAAGTCCTTTAGTTAACATTCTAAAATGCTCAGAGATATCTGAAACTATCGCAGAAAAGCCTTTGAATACAATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTACGATGGACCAGTTAATGGATCTGGGAAGGCCTTAAGTGGAGTTCGAAATGGTGCTGTTTCAGCTAGCTCTACCACCACTGAATATCCGATATCAAAGACCACTACCAGGAAGGATGTACTGGATTCTGCTTTCGTTGCCCGCCTTGTTGAGATTCTGAAGTCCTCTTCTCCCAGTTTACAAGCAAAAGCCGCATCAATTCTCGAGTTTGTTGCATTGACTGACCCAACTATGGTCTCTACCATATCTATAGATATTGAATCTGCTCTCGATGAAGTCTTTCAGCAAAAAATTTTGAGAATTTCAGGTGGAGAACCTGATGTAGAAGACCAGGTTTCAGAAGCATACCCGATCGAAGTTGAAGAAGCCGGGCTTGCCATATCAGCAGCATCCCGGTTAATGACAAGACTACTCGACTGTCAGCATTTTCGCGACAAAGTAAACTCCTCCCATTTCATCGGCTTGCTCCGAAAAATCCTCAAGTCTTGTATACCTCTCCGCACCAAAGACTGGGTGGCTGCTTGCCTAGTTAAACTTAGCCCTCTCTCCAGTGACAACCCAAGTCTTGACCCAATCAATGTGGAAGTTACAGTTTATGAGACAATCCCAAGACTCATAGAACAGATTAAAACTTCCTTCTCTCCGGAAGCACAGGAATCTGCTGTTGTAGAACTGAACAGAATAATATCTGAAGAAGCGGTTCATTCTGCTAGAGCTATTGTATCTGAGGGAGCAATTTATCCATTGGTGAAGCTGATAGAAGAAGGAAGTGAAAGGGCCATTGAAGCAGGATTGGCTATATTATATAATCTGAGCATGGACTCTAAGAACCATTCATTGATTGTGGCTGCTGGGGCTGTCCCATTATTGAGAAGGATTGTGCTCTCACAAAGGCCTCAATGGGAAAAGGCACTTCATTTACTCAGGAATTTGCCTACTTGA 2580 0.4287 MFASTILIPSKLKTRHFVLVPPNTSIEIFPTGSRRTYRRSRVSAYSKLVHQSFRLYLKSNIRPIVASRVSNGDDGAFDATPQQSSPHPSDIEEVKSTSSGLSDGYVALFVRMLGLDHDLLDREQAIIALWKYSLGGKQCVDTLIRFPGCINLTVNLLRSDSSLACEAAAGLLRSLSSVNLYRNSVAKSGAIEEINRLLRQSSLAPEVKEQSLSTLWNLSVDEKLRIKLANSDSLPLIIKYLEDEDVKVKEAAGGILANLALSHVNHSILVEAGVIPKLAKFLTSDPEGSKIIKKEAKNALLEFVKDEYYKILVVEEGLVPVPLIGDEAYKSFSLDLHSWPKFPDGTEIERGSPKTSRYGASELLLGLNIDDKITNIEEEKINAIEGQAQQRFLARIGAIEWEGKGASDSESSDRQQLTLLPWKYGVARLALILELEDMSSIKRAAESIADVSINERMRIAFKEAGAVKHLVRLLNCDAAAVRLAVTQALERLSASNGVCQHIESEGVLSPLVNILKCSEISETIAEKPLNTIARILDPSKEMKLKFYDGPVNGSGKALSGVRNGAVSASSTTTEYPISKTTTRKDVLDSAFVARLVEILKSSSPSLQAKAASILEFVALTDPTMVSTISIDIESALDEVFQQKILRISGGEPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDCQHFRDKVNSSHFIGLLRKILKSCIPLRTKDWVAACLVKLSPLSSDNPSLDPINVEVTVYETIPRLIEQIKTSFSPEAQESAVVELNRIISEEAVHSARAIVSEGAIYPLVKLIEEGSERAIEAGLAILYNLSMDSKNHSLIVAAGAVPLLRRIVLSQRPQWEKALHLLRNLPT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1883 859 Gene3D - 412 652 IPR011989 -
Alju12g1883 859 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 52 859 - -
Alju12g1883 859 MobiDBLite consensus disorder prediction 76 97 - -
Alju12g1883 859 SUPERFAMILY ARM repeat 85 839 IPR016024 -
Alju12g1883 859 Gene3D - 92 325 IPR011989 -
Alju12g1883 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 232 274 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 262 305 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 177 220 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 495 537 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 779 819 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 820 859 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 454 494 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 221 261 IPR000225 GO:0005515
Alju12g1883 859 SMART arm_5 579 619 IPR000225 GO:0005515
Alju12g1883 859 Gene3D - 664 859 IPR011989 -
Alju12g1883 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 233 IPR000225 GO:0005515
Alju12g1883 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 790 832 IPR000225 GO:0005515
Alju12g1883 859 MobiDBLite consensus disorder prediction 75 97 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1883 143 325 U-box Gene Family AT1G23030 28.962 2.33e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1883 12 39913067 39919095 Alju12g1883 12 39913067 39919095 ECH