Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1870 ATGAAAAGAGAGCATCATCAGCTTTGTCCCAACCCAGGCGACTCATTCATGACCGCCAGCTCTAGCGGCAAATCTAAGCTATGGGACGATGAGACTCAAAACGGTGGCATGGACGAGCTTCTCGCCGTCCTCGGCTACAAGGTGAGGTCGTCGGACATGGCCGATGTTGCCCAGAAGCTTGAACAGCTTGAAGAAGCTATGGGTAATGTTCAGGGCGGTATCTCTCAACTCTCATCAGAAACTGTTCATTACAATCCTTCTGATCTATCTACCTGGCTTGAAAGTGTGCTTTCTGAGCTCAATCCGTCTCCGAATCTTGACTCTTTGACTGCCGTTGCCGGCGCCGTCTCTGCGCCGCCGCCACTCCCTCCGCCTCCCCCTCCACCGGCTGATGATTCTTCCTTCTTGGCTCCGGCGGAATCATCTACTATTACCTCCATTGATTTCACTGACCATAGCCAGCAGCAACATTTGAATTCCCTGCATAAGCAACGAGATAGCTTAATCTTCGAAGATGCATCTTCCTCGGATTATGATCTCAAGGCTATTCCAGGCAAAGCCATCTACAGCAGTCAAACTCAAACTCAAACCCAGCACCAGCAACAGCTTGAATCTCCTCCTTCCCGAGAAAGCAAACGGTTGAAGCCCTCTTCTGTGTTCAATCCTGCATTGTTCTCGTCCTCTCCTCTGGGGTCTTATACATTACCCAACGAGTCGACTCGTCCTATTGTCCTCGTCGATTCACAAGAAAACGGAATTCGACTTGTTCATGCATTGATGGCTTGTGCGGATGCCGTACACCAGAATAATTTCGCTCTCGCAGAAGCTTTGGTCAAACAGATCGGATTCCTCGCGGTGTCTCAGGCCGGAGCTATGCGAAAGGTCGCGACCTACTTCGCCGAAGCGCTTGCTCGCCGTATATATCGGCTTTACCCAGAAAATCCCCTCGACCATTCTTTTTCCGACATGCTTCAGATTCACTTCTACGAGACCTGTCCATATCTCAAATTCGCCCATTTCACCGCCAACCAAGCCATCCTTGAAGCCTTCGAAGGTAAAAGGCGAGTTCATGTCATCGATTTCAGTATGAATCAAGGGATGCAATGGCCGGCTCTCATGCAAGCACTGGCTCTCCGACCTGGCGGTCCACCGGCGTTCCGGTTAACAGGAATCGGACCACCAGCTCCGGATAATTCAGATCACCTTCAGGAAGTTGGTTGGAAACTTGCTCAGCTAGCAGAAACCATTCACGTTGAATTTGAGTACAGAGGGTTCGTGGCGAACAGTTTGGCCGATCTAGATGCTTCTATGCTCGACCTGAGACCGAGTGAGGTTGAGTCAGTGGCTGTTAACTCAGTGTTCGAGCTTCACAAATTGTTGGCCCGACCCGGTGCAATCGAGAAGGTCTTATCGGTGGTGAAGCAGATGAAGCCGGAGATAGTCACCGTCGTAGAGCAAGAAGCAAACCACAACGGACCGGGGTTCCTGGACCGGTTCACCGAGTCACTGCACTATTACTCGACCCTGTTCGACTCGTTGGAAGGATCGGTGGACACTCAGGATAAGATCATGTCGGAGGTATATCTTGGAAAGCAAATCTGTAACGTGGTTGCCTGTGAAGGGGTGGACCGGATTGAGAGGCACGAAACACTGAGTCAGTGGCGGAACCGGTTGGGTTCTGCCGGGTTCGCTTCGGCTCACCTGGGCTCTAACGCTTTTAAGCAAGCAAGCATGCTTCTGGCTCTCTTCGCCGGTGGAGATGGCTACAGAGTAGAAGAAAACCACGGGTGTCTGATGCTGGGTTGGCATACTCGGCCATTGATCGCCACATCGGCGTGGCGACTCGCCTAG 1851 0.5176 MKREHHQLCPNPGDSFMTASSSGKSKLWDDETQNGGMDELLAVLGYKVRSSDMADVAQKLEQLEEAMGNVQGGISQLSSETVHYNPSDLSTWLESVLSELNPSPNLDSLTAVAGAVSAPPPLPPPPPPPADDSSFLAPAESSTITSIDFTDHSQQQHLNSLHKQRDSLIFEDASSSDYDLKAIPGKAIYSSQTQTQTQHQQQLESPPSRESKRLKPSSVFNPALFSSSPLGSYTLPNESTRPIVLVDSQENGIRLVHALMACADAVHQNNFALAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLYPENPLDHSFSDMLQIHFYETCPYLKFAHFTANQAILEAFEGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLDLRPSEVESVAVNSVFELHKLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPGFLDRFTESLHYYSTLFDSLEGSVDTQDKIMSEVYLGKQICNVVACEGVDRIERHETLSQWRNRLGSAGFASAHLGSNAFKQASMLLALFAGGDGYRVEENHGCLMLGWHTRPLIATSAWRLA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1870 616 ProSiteProfiles GRAS family profile. 246 614 IPR005202 -
Alju12g1870 616 MobiDBLite consensus disorder prediction 13 29 - -
Alju12g1870 616 MobiDBLite consensus disorder prediction 191 215 - -
Alju12g1870 616 MobiDBLite consensus disorder prediction 1 32 - -
Alju12g1870 616 MobiDBLite consensus disorder prediction 114 136 - -
Alju12g1870 616 Pfam GRAS domain family 255 614 IPR005202 -
Alju12g1870 616 FunFam DELLA protein GAI 36 100 - -
Alju12g1870 616 Coils Coil 60 80 - -
Alju12g1870 616 MobiDBLite consensus disorder prediction 117 133 - -
Alju12g1870 616 SMART DELLA_2 38 110 - -
Alju12g1870 616 Gene3D - 36 100 IPR038088 -
Alju12g1870 616 Pfam Transcriptional regulator DELLA protein N terminal 38 104 IPR021914 -
Alju12g1870 616 MobiDBLite consensus disorder prediction 191 205 - -
Alju12g1870 616 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 196 610 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1870 Alju-ChrAlju12 39737945 39739795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1870 1 616 GRAS Transcription Factor Family AT2G01570 64.557 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju12g1870 GRAS 6.1e-137 CL0063