Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1866 ATGCAGAAAGCAGTCAAGTTCAGAGGTGGAAACAGAGTTATTCATTGGATTTCCAGAAACCAGAGCAAGACGAAGCTTTCTGCCTCCTCTCCCTCCAAGGTCCAGCTGACCATTAGAAGAAATTGGAATAGAGACGCTAAAGGAAGAAAAAAAAAACGGAGGAAACAGAAAGGTTATCGTGCAACTTCCTCTGAGTCCTTGCTTCATCACTGTTCTTGCTTCTTTTCCTTTGTTTTCCGACCGCCTTCTTCTTCTTCTTCTTCCTGTGATTTTCTCAGCCACTCTGCAATGGATAACATCCTGGGTCTTCTCAAGCTTAGCATCAAAAAAGGAATTACTCTGGCAATTCGTGATACTCGTAGCAGTGACCCTTATGTCGTTGTGACCTCGGGCGATCAGAAAGTGAAGACTCGTGTCATTAAGAATAACCGCAACCCTCAGTGGGATGATGAATTGACTCTCTCTGTTAAGGATGTCAACTCTCCAATTCATCTTGCAGTTTTTGACCAAGACACATTCACTGTGGATGACAAAATGGGGGATGCAGAAATAGATATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGGCCAACCTCCCAAATGGTAGTGTAGTAAAAAAAATTCAACCAGATGGGAAAAACTACCTTGCTGAGGAGAGCAGCTGCATATTGAAGAACGGAAAAGTCACCCAAGAAATGACTCTTGCTTTGAGAAATGTGGAATGTGGCTACGTAGTCGTCGAAATTGAGTGGAAGGAAGTTCCAGGCTGCAAGGGCTTATCTGGGATTGAGATCTAA 801 0.432 MQKAVKFRGGNRVIHWISRNQSKTKLSASSPSKVQLTIRRNWNRDAKGRKKKRRKQKGYRATSSESLLHHCSCFFSFVFRPPSSSSSSCDFLSHSAMDNILGLLKLSIKKGITLAIRDTRSSDPYVVVTSGDQKVKTRVIKNNRNPQWDDELTLSVKDVNSPIHLAVFDQDTFTVDDKMGDAEIDIKPYLQCLKMNLANLPNGSVVKKIQPDGKNYLAEESSCILKNGKVTQEMTLALRNVECGYVVVEIEWKEVPGCKGLSGIEI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1866 266 SMART C2_3c 103 198 IPR000008 -
Alju12g1866 266 Pfam C2 domain 103 188 IPR000008 -
Alju12g1866 266 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 98 187 IPR035892 -
Alju12g1866 266 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 99 259 IPR044562 -
Alju12g1866 266 Gene3D C2 domain 98 256 IPR035892 -
Alju12g1866 266 MobiDBLite consensus disorder prediction 44 58 - -
Alju12g1866 266 MobiDBLite consensus disorder prediction 42 61 - -
Alju12g1866 266 ProSiteProfiles C2 domain profile. 81 199 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1866 Alju-ChrAlju12 39700754 39706824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1866 134 262 C2H2 Transcription Factor Family AT1G70790 58.779 8.80e-50 159