Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1859 ATGTCTGATTCATTCAAGCCTCTCCCTCTTACTACTCCAAATTCCACCCTTAATTCTCATGCACCTCCCAAAATCATACCCTTCTGTATTTGCGCGCACTGCACCAATCTCATCTCTTTGAATCATCCTCTGGGAGAAGAAGGATTGAAATCTCAGCAAAGCACGAGCAGGTGGAGTCCAACGCCGGCACAGTTGCTGGTGCTTGAAGAACTGTACAGACAAGGTACAAAGACGCCAACGGCCGAACAAATACAGCAAATTGCTTCACAGCTACGTCGTTTTGGCAAGGTCGAAGGCAAGAACGTGTTCTACTGGTTCCAGAATCATAAAGCTAGAGAGCGCCAGAAACGACGTCGCCGGGAAACGGAGCAGGGAGCTACTGCTTCTGATTCAGCACAAGACAAGCAACTGTACGTTGTTAATGTGAGAAGCTCAGAGGAAAAGCAAGACTCAGCAACAGGGTTGAGAGGGACAGATTATCAAGTTAAAGAGACAAAAAAGTGGGCATCTTCAAACTGTAGTGCCCTTCCACAGGAAATAGCAGATATTGGACCAAAAGGGTGGACTCAACTTGAAGAGAAAAGAACACAAGTTTTGAAACCAGAGAAAACAACACCTCTCTCACAAAACTTTTCCTCTCAAAATCATAATTTACCATTTATAATCAACAGAGAAAACTGCACCTACTGTGATGAAGAAGAATATCCAAAAACAAGAACCCTTGAGCTTTTTCCTCTTAAGAAAGATGACCAACATGGCATGTCTCTTAATGACAGGAAATCTAGGCTTTGTGCATCAACTTCCCTTGGAACAGAAATTGCCACCTCAAGCCAGTTTTTTGAGTTCCTTCCTTTGAAAGACTGA 864 0.4363 MSDSFKPLPLTTPNSTLNSHAPPKIIPFCICAHCTNLISLNHPLGEEGLKSQQSTSRWSPTPAQLLVLEELYRQGTKTPTAEQIQQIASQLRRFGKVEGKNVFYWFQNHKARERQKRRRRETEQGATASDSAQDKQLYVVNVRSSEEKQDSATGLRGTDYQVKETKKWASSNCSALPQEIADIGPKGWTQLEEKRTQVLKPEKTTPLSQNFSSQNHNLPFIINRENCTYCDEEEYPKTRTLELFPLKKDDQHGMSLNDRKSRLCASTSLGTEIATSSQFFEFLPLKD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1859 287 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Alju12g1859 287 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 49 282 IPR044555 GO:0003700|GO:0099402
Alju12g1859 287 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Alju12g1859 287 CDD homeodomain 57 111 IPR001356 GO:0003677
Alju12g1859 287 MobiDBLite consensus disorder prediction 113 137 - -
Alju12g1859 287 Gene3D - 45 130 - -
Alju12g1859 287 SUPERFAMILY Homeodomain-like 50 119 IPR009057 -
Alju12g1859 287 SMART HOX_1 53 120 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1859 Alju-ChrAlju12 39593588 39596278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1859 55 179 Wox Gene Family AT3G18010 51.969 2.25e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju12g1859 Homeodomain 4.6e-19 CL0123