Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1843 ATGACTCTCACAGGGCTGGTTTCACTTGTGTTCAATTTCATTGGTCTTGTCCCATACAAGATCAATCATCAGAAGCAGGGAATTGCAAGTGAATCACCGGCAGAAGCACCGAGGTTGATCGAAGTTGATTGGTGCTGTGTGTGTTTGTCGAGGTTAAAGGAGGAAGAAGAAACAAAGATTCTTCCTTGTTTTCACAGATTCCATAAACTCTGTGTGGATAAATGGCTCAATGTTAATAAGGGTCGCCACAAAACATGTCCTCTGTGTCGGTTCTCAATGGTGGCAGAGGATCAGAATAATAAGTCTCTTGATGCTCCTTCTGCAGAATTCACTGAGGATATGCTTGATCCTGTTCGTATGGAATTTATTTGGCCCCCTAACTTGTGCTACTGGTGA 396 0.4318 MTLTGLVSLVFNFIGLVPYKINHQKQGIASESPAEAPRLIEVDWCCVCLSRLKEEEETKILPCFHRFHKLCVDKWLNVNKGRHKTCPLCRFSMVAEDQNNKSLDAPSAEFTEDMLDPVRMEFIWPPNLCYW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1843 131 ProSiteProfiles Zinc finger RING-type profile. 45 90 IPR001841 -
Alju12g1843 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 100 IPR013083 -
Alju12g1843 131 PANTHER TARGET OF ERK KINASE MPK-1 23 96 - -
Alju12g1843 131 SMART ring_2 45 89 IPR001841 -
Alju12g1843 131 Pfam Ring finger domain 44 90 IPR001841 -
Alju12g1843 131 SUPERFAMILY RING/U-box 39 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1843 Alju-ChrAlju12 39445230 39445995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1843 29 93 C3H Transcription Factor Family AT1G26800 42.029 3.88e-13 61.6