Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1842 ATGTCAACCTCCACGTTTCGCCGTACGAACCTTCTTCCGGAACCTTCCAGCATTTGCCCAAACTTGCAAGTCTTTGCTTTTCTCAGATATTTTTGGTGGTTTGTGTTCGACGGTTCGAGGTTGATGGAGGCTGATATTGATTCAGTACGTTCCTCATCATCATCTTCTTACTACACCATTCTTGGTGTCGATTCTGATTCTTCTCTTGAAGAAATAAGGCGCGCTTATCGCAGGCTTGCAATGCAATGGCATCCGGATAGGTGGACAAGAACACCTTCTCTACTGGGAGAAGCAAAACGAAAGTTCCAGCAGATTCAGGAAGCCTATTCAGTATTGTCGGACGAAAGCAAAAGAAGGATGTACGATGCAGGCTTGTACGATCCCCAAGAAGAAGAGGGTGAGGGGTTTTATGAGTTTGTGCAAGAGCTGAAGACGCAAGTGAGCAGAGAGGAGAGGGAATATAGCATAGAGGAGTTGCAGAGCATGCTAATGGAAATGGCTCAAGGATTTGAGGATCCTGCATGGCAATTTGAAGCATCACCAGTGGAAGAGGAAAGCCACTGCTCAAAGAGGGCCCGCCTGGACTCTAGCTTTAACATGAATTTGGGGTCACCTTTCTATGAGCCTGGGTTTCATTTGTATGAAACCAGGGATTACTATAGTTAG 666 0.461 MSTSTFRRTNLLPEPSSICPNLQVFAFLRYFWWFVFDGSRLMEADIDSVRSSSSSSYYTILGVDSDSSLEEIRRAYRRLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDESKRRMYDAGLYDPQEEEGEGFYEFVQELKTQVSREEREYSIEELQSMLMEMAQGFEDPAWQFEASPVEEESHCSKRARLDSSFNMNLGSPFYEPGFHLYETRDYYS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1842 221 PANTHER PUTATIVE, EXPRESSED-RELATED 52 186 - -
Alju12g1842 221 Pfam DnaJ domain 57 122 IPR001623 -
Alju12g1842 221 Coils Coil 95 115 - -
Alju12g1842 221 ProSiteProfiles dnaJ domain profile. 56 125 IPR001623 -
Alju12g1842 221 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Alju12g1842 221 CDD DnaJ 57 114 IPR001623 -
Alju12g1842 221 PRINTS DnaJ domain signature 58 76 IPR001623 -
Alju12g1842 221 PRINTS DnaJ domain signature 97 117 IPR001623 -
Alju12g1842 221 PRINTS DnaJ domain signature 76 91 IPR001623 -
Alju12g1842 221 PRINTS DnaJ domain signature 117 136 IPR001623 -
Alju12g1842 221 SMART dnaj_3 55 117 IPR001623 -
Alju12g1842 221 Coils Coil 140 160 - -
Alju12g1842 221 Gene3D DnaJ domain 43 146 IPR036869 -
Alju12g1842 221 SUPERFAMILY Chaperone J-domain 53 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1842 Alju-ChrAlju12 39440196 39441829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1842 52 123 C2H2 Transcription Factor Family AT1G74250 43.836 4.84e-12 62.8