Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1833 ATGTCGGAGAATGGAGAGACGGGGATAAGTTATCTTCACGGCGACCTGGACTTGACCATCTTTGAGGCTCGAAACTTGCCCAACATGGATTTTTTCTCCGAGCATTTCCGCCGTTGCGTTACCGCATGTGACACTGTCAAGTGCCGTTCCGTTGACGACCAGAAGACCCCCCGTCGCCGGAGGATTATCACTAGCGACACATACGTCACCGTCTCAGTGCCGCATGCTACTGTTGCCCGCACGCGTGTGGTAAAGAATATGCCGAATCCTCAGTGGAACGAACGATTCAGTCTCCCCTTGGCCCACCCCGTGGAGAATTTGGAATTTCGAGTCAAAGACGACGACGTATTTGGTGCTCAGCTTGTGGGAACTGTCAACATTCTTGCACAGAGAATTGCCTGCGGTGAGTTTATCGCCGGATGGTTCCCCATTCTTGGTTCTTCCGGTAAGCCTCCCAAGCCAGACACCGCACTTCGTATAGAAATGAAATTCGTAGCCGTGGAAGAGAACATGTTGTACCGGCGAGGCATTGCGGCTGATCCTGAGCACAAGGGCGTGTGGCAAACGTATTTTCCTGTACGGAAGGGAAGTTCGGTGAGGTTGTACCAAGATGCCCATGTTCCTAATGGCATTTTACCTGAGATAAAGCTAGAGGGCGGAGAGGTTTACAAGCATGGAAAGTGTTGGGAGGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTTTATCTTGTGGGTTGGTCAATCTACCACAAAGTGAAGATTGTGAGGGAACCTAGCAGGCCTTTGCCACGAGGTGGGGATTTGACTCTTGGTGAATTGCTCAAATACAAATCTGAAGAAGGGGTGCGAGTTCTCTTGCTGATTTGGGATGATAAGACTTCCCATGACAAGTTGTTCTTCAAATCGGCTGGAGTAATGCAGACACATGACGAAGAAACCAGGAAATTTTTTAAACATTCTTCTATTATGTGTGTTCTAGCACCACGGTATGCTAGCAGCAAGTTGAGTTATATGAAGCAACAAGTTGTTGGAACTGTTTTCACATATCACCAAAAATGTGTCCTTGTCGACACGCAGGCTTTTGGTAACAACCGTAAGATAACTGCTTTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATCGACTTTTTCGTGATCTTGATACTGTATTTTCGGGTGATTTTCACAATCCTACATTTTCAGCTGGAACAAGGGCTCCTAGGCAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTCTTAATTTTGAACAGCGTTGGAGAAAAGCAACAAAGTGGAGAGAGTTTGGAATACTTTTCAAAAAGGCTTCCCATTGGCATGATGACGCTTTACTGAAAATAGAACGCATCTCATGGATATTAAGTCCTTCCTTCCCTCGCTCAAGGGATGGTAGTACGACTATTCCAGGAGATACTCCTTTACTATGGGTCAACAACGAAGATGATCCTGATAACTGGCATGTTCAGATATTCCGCTCCATTGACTCAGGATCCCTGAAAGGGTTTCCCAAAAGTCTTGATATTGCTCAGTCACAGAATCTTACATGCGCTAAAAATTTAGCAATAGATAAAAGCATTCAAACAGGATACATACAAGCGATCAGATCTGCTCAACACTTTATCTATATTGAAAACCAATATTTTCTTGGATCATCATATGCTTGGCCATCTTATAAGGATGCAGGAGCTGATAATCTCATTCCAATGGAACTAGCACTCAAAATTGCTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTGTATATTGTTTTACCAATGTGGCCAGAGGGTGATCCTAATTCAGCGGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAAATGATGTACGATGTTGTTGCAAGAGAATTAAAGTCAATGGAACTAGTTGATTTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAACCGGGAAGAATTCCATGAAGAAGACTCAAGTTCAAATGGTGCTTCGGTCTCCAGTTCGCATAAATATCGCCGATTTATGATTTATGTGCATGCTAAGGGGATGGTTGTTGACGATGAGTATGTTATCGTGGGATCAGCTAATATAAATCAAAGGTCTATGGCTGGCACTAAAGATACTGAGATAGCCATGGGTGCATATCAACCTCATTACACTTGGTTTGCTAAGAAAAGACATCCATATGGTCAGATTTATGGTTACAGAATGTCACTGTGGGCAGAGCATCTTGGGTTGTTAGACGCAAATTTTGAAGAACCAGAGAGTTTGGAATGTGTGCGTAAGGTGAATTCCATTGCGGAAGAGAATTGGAGAAGATACACGTCAGAGAACTTCTCATTATTGCAGGGGCATATTCTGAACTATCCTGTACAAGTAGATGCTGATGGGAAGGTTAGTCCTATACCTGAATATGAGACTTTTGTGGATGTTGGCGGGAAAGTAATGGGATCTCATTCTTCCACAATTCCTGATATTCTAACAACTTAG 2547 0.4389 MSENGETGISYLHGDLDLTIFEARNLPNMDFFSEHFRRCVTACDTVKCRSVDDQKTPRRRRIITSDTYVTVSVPHATVARTRVVKNMPNPQWNERFSLPLAHPVENLEFRVKDDDVFGAQLVGTVNILAQRIACGEFIAGWFPILGSSGKPPKPDTALRIEMKFVAVEENMLYRRGIAADPEHKGVWQTYFPVRKGSSVRLYQDAHVPNGILPEIKLEGGEVYKHGKCWEDICYAISEAHHMVYLVGWSIYHKVKIVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLIWDDKTSHDKLFFKSAGVMQTHDEETRKFFKHSSIMCVLAPRYASSKLSYMKQQVVGTVFTYHQKCVLVDTQAFGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFSAGTRAPRQPWHDLHCRIDGPAAYDVLLNFEQRWRKATKWREFGILFKKASHWHDDALLKIERISWILSPSFPRSRDGSTTIPGDTPLLWVNNEDDPDNWHVQIFRSIDSGSLKGFPKSLDIAQSQNLTCAKNLAIDKSIQTGYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYIVLPMWPEGDPNSAAMQEILFWQSQTMQMMYDVVARELKSMELVDLHPQDYLNFYCLGNREEFHEEDSSSNGASVSSSHKYRRFMIYVHAKGMVVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWFAKKRHPYGQIYGYRMSLWAEHLGLLDANFEEPESLECVRKVNSIAEENWRRYTSENFSLLQGHILNYPVQVDADGKVSPIPEYETFVDVGGKVMGSHSSTIPDILTT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1833 848 Pfam Phospholipase D C terminal 768 837 IPR024632 -
Alju12g1833 848 Pfam PLD-like domain 552 731 IPR025202 -
Alju12g1833 848 PANTHER PHOSPHOLIPASE D 8 837 IPR015679 -
Alju12g1833 848 FunFam Phospholipase D delta 219 463 - -
Alju12g1833 848 Gene3D C2 domain 12 174 IPR035892 -
Alju12g1833 848 SMART C2_3c 15 141 IPR000008 -
Alju12g1833 848 PIRSF PLD_plant 1 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju12g1833 848 Gene3D Endonuclease Chain A 515 740 - -
Alju12g1833 848 SMART pld_4 693 720 IPR001736 GO:0003824
Alju12g1833 848 SMART pld_4 347 382 IPR001736 GO:0003824
Alju12g1833 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 347 382 IPR001736 GO:0003824
Alju12g1833 848 Pfam Phospholipase D Active site motif 347 382 IPR001736 GO:0003824
Alju12g1833 848 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Alju12g1833 848 SUPERFAMILY Phospholipase D/nuclease 189 453 - -
Alju12g1833 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 149 IPR035892 -
Alju12g1833 848 CDD C2_plant_PLD 11 165 - -
Alju12g1833 848 Gene3D Endonuclease Chain A 218 462 - -
Alju12g1833 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Alju12g1833 848 Pfam C2 domain 14 144 IPR000008 -
Alju12g1833 848 SUPERFAMILY Phospholipase D/nuclease 545 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1833 Alju-ChrAlju12 39337169 39343438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1833 1 684 Phospholipase D Gene Family (Wang group) AT4G35790 68.822 0.0 1023