Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1827 ATGGCTTCGCCGTTGAGTTCTGCTAGTCGATTTCTCCTGTTCGTGGTGATACTGGTGATCTTGGGTTTGCGAAGCTGTTATGGATTCCGGACTCTCGGGTTCACGATGCATCACCGGTATTCGGATCCCGTTAAGGGAATCCTAGGTATTCATGACCTACCGGCCAGGGGAAGTCGAGAGTACTACGTGGCTATGTCTCACAGAGACCGCCTTGTCCGAGGTCGTGGTCTCGCCGGGGTGGACCCGACGGCTCTGACGTTCTCCTCCGGCAACGATACTTTTCGGATTGCTTCCTTGGGATCTTTGCATTACGCCAATGTTTCTGTTGGAACACCACCTGTATGGTTTCTGGTGGCATTAGACACTGGCAGTGACTTGTTTTGGTTGCCATGCAATTGTACCGACATGAACTGCGTCCATGCCTTGGGGACATCAAAAGGGCAGAAACTGAAACTTAACATCTACGATCCTCATGCATCCTCAACAAGCAAGAATGTTCCCTGTAACAGCACCATTTGTAGCCCTAAGAAACAATGTCCTTCATCTAACAGCTCTTGTGTATATCAAGCTCGCTACCTTACGGAAAACACATCATCAACTGGAGTCCTAGTGGAAGATGTCTTGCACTTAGTTACAGATGATGATCAGACCAAACAAGTGGACGCGCATATTAATTTTGGATGTGGTAAAGTTCAAACAGGTTCCTTCTTGACTGGAGCAGCACCAAATGGTTTGTTTGGGCTTGGTATAGGGAATATATCAGTTCCGAGCATATTAGCTAAAAAAGGGCTCACTTCAAACTCTTTCTCTATGTGTTTTGGGGATGATGGTTCTGGAAGAATAAGATTCGGAGATAATGGCAGCTCAGACCAAAGGAAAACACCTATCAACCTTGGCGCATTGCATCCAAGTTACAACATCAGTATCACTCAAATTATTATTGGTCAAAAAGCTACAGACTCCGAGTTCAATGCAATTTTTGACACTAGAACTTCATTTACACACCTAAACGACCCTGCTTATACAAATATTACAAGCAGTTTCAATTCCATGGTCAAAGGAAAACGTTACCAATTTGATTCTCGTATTGAGATGCCCTTTGAGTATTGTTATGAAAATACAACGAGCAATCAGACCAGTCCTGTATTTCCCTCCTTGAACTTGAAAATGAAAGGGGGAGACGATTATTATGTAATTGATCCACTTGTTTATGTTGTTATTGAGGGTGTTGAAACTTACAGCACTGTGATTTGCCTTGGCATTGTGAAAAGTGTTGACGTGAATATCATAGGACAGAATTTCATGACTGGTTACCATATAGTCTTTGATCGAGATAACATGATTCTGGGTTGGAAGAATTCCAGCTGTTATGATGACAAGATCTCAAACACTGCACATTCTCCGGCTGTTCCTCCTGTTGTTTCGCCTACTGTTTCTCCTGCCAAATCCGAAGCCTTGATTAACCAGTCTGAAGCTTCCAGTCCACAGACCCCTAATCACTCTTTCAAAGACAAACCTTTTGTGGTTACGTTTCTTCTACTGGTTCTTTCTCCCGGTCAAATTTCCAAATCATTAAGTCTTCTCGCTAAAATGGCTATCATAATTGCAGTCATGAGCTCAATTATTTTGTTCTCAGTAGTTCCTTTAGGTAATTCACTTGGCTTAAATTACTATGAGAATGCATGCCCTGACCTGGAGTTCATTGTTGCTATGGTCGTGAGGGAAGCAACTTCTAAGGACAAAACTGTTCCTGCAGCACTTCTTCGAATGCACTTCCATGATTGTTTCATTAGGGGATGTGATGCCTCAGTGCTGCTAAACTCAAAAGGAAGCAACAAAGCAGAAAAAGATGGGCCACCAAATAATTCTTTGCATGCATTCTATGTCATTGATAATGTGAAGAGCGAAGTAGAAAAGTCATGCCCTGGTGTTGTCTCTTGTGCTGACATCCTAGCACTAGCAGCAAGGGATGCAGTTTTTCTGTCTGGAGGTCCAAGTTGGGATGTACCTAAAGGAAGAAAGGATGGTAGAACATCTGCGGCCAGTGAAACCAGACAATTGCCAGCACCAACCTTCAACATATCACAGTTGCAGCAGAGCTTCTCTCAAAGAGGACTGTCAACAGAGGATCTTGTCGCGTTGTCTGGAGGACATACTTTAGGATTCTCTCATTGTTCATCCTTCCAGAACAGAATTCACAATTTCAATGCTACACATGACGTGGATCCTTCATTAAATCCATCCTTTGCTGCAAAATTGAAGTCAATCTGTCCACAGAAAAATCAGGCAAAGAATGCCGGCACCACCATAGACCCTTCTTCAACTACTTTCGATAACACGTATTTCAAGGCAATCCTTCAAGGGATGGGCATATTTTCTTCTGATCAGGCTCTGCTTGATACCCCAAAGACCAAGGAATTGGTGTCCAAGTTTGCTACCTCACAAGAGGCCTTCTTCAAATCTTTTGCCAATTCGATTATCAAAATGAGTAGCATCAATGGTGGGCAAGAGGTTAGGAAGGACTGCAGGGTTGTCAATTAG 2541 0.4333 MASPLSSASRFLLFVVILVILGLRSCYGFRTLGFTMHHRYSDPVKGILGIHDLPARGSREYYVAMSHRDRLVRGRGLAGVDPTALTFSSGNDTFRIASLGSLHYANVSVGTPPVWFLVALDTGSDLFWLPCNCTDMNCVHALGTSKGQKLKLNIYDPHASSTSKNVPCNSTICSPKKQCPSSNSSCVYQARYLTENTSSTGVLVEDVLHLVTDDDQTKQVDAHINFGCGKVQTGSFLTGAAPNGLFGLGIGNISVPSILAKKGLTSNSFSMCFGDDGSGRIRFGDNGSSDQRKTPINLGALHPSYNISITQIIIGQKATDSEFNAIFDTRTSFTHLNDPAYTNITSSFNSMVKGKRYQFDSRIEMPFEYCYENTTSNQTSPVFPSLNLKMKGGDDYYVIDPLVYVVIEGVETYSTVICLGIVKSVDVNIIGQNFMTGYHIVFDRDNMILGWKNSSCYDDKISNTAHSPAVPPVVSPTVSPAKSEALINQSEASSPQTPNHSFKDKPFVVTFLLLVLSPGQISKSLSLLAKMAIIIAVMSSIILFSVVPLGNSLGLNYYENACPDLEFIVAMVVREATSKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNNSLHAFYVIDNVKSEVEKSCPGVVSCADILALAARDAVFLSGGPSWDVPKGRKDGRTSAASETRQLPAPTFNISQLQQSFSQRGLSTEDLVALSGGHTLGFSHCSSFQNRIHNFNATHDVDPSLNPSFAAKLKSICPQKNQAKNAGTTIDPSSTTFDNTYFKAILQGMGIFSSDQALLDTPKTKELVSKFATSQEAFFKSFANSIIKMSSINGGQEVRKDCRVVN 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1827 846 Gene3D - 556 846 - -
Alju12g1827 846 FunFam Peroxidase 556 699 - -
Alju12g1827 846 PRINTS Plant peroxidase signature 784 801 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 709 721 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 644 654 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 768 783 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 663 678 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 625 638 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 562 581 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Plant peroxidase signature 586 606 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Haem peroxidase superfamily signature 584 598 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Haem peroxidase superfamily signature 645 662 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Haem peroxidase superfamily signature 710 725 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Haem peroxidase superfamily signature 663 675 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 PRINTS Haem peroxidase superfamily signature 770 785 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 FunFam Aspartyl protease family protein 1 288 458 - -
Alju12g1827 846 SUPERFAMILY Acid proteases 98 457 IPR021109 -
Alju12g1827 846 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 118 129 IPR001969 GO:0004190|GO:0006508
Alju12g1827 846 FunFam Peroxidase 688 829 - -
Alju12g1827 846 ProSiteProfiles Peptidase family A1 domain profile. 103 452 IPR033121 -
Alju12g1827 846 ProSiteProfiles Plant heme peroxidase family profile. 552 846 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 ProSitePatterns Peroxidases proximal heme-ligand signature. 710 720 IPR019793 -
Alju12g1827 846 Pfam Xylanase inhibitor N-terminal 104 285 IPR032861 -
Alju12g1827 846 Gene3D Acid Proteases 286 457 IPR021109 -
Alju12g1827 846 PANTHER PEROXIDASE 25-RELATED 536 834 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 Pfam Peroxidase 571 814 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 CDD secretory_peroxidase 553 845 IPR033905 GO:0004601|GO:0042744
Alju12g1827 846 FunFam Aspartyl protease family protein 1 90 285 - -
Alju12g1827 846 Pfam Xylanase inhibitor C-terminal 316 452 IPR032799 -
Alju12g1827 846 SUPERFAMILY Heme-dependent peroxidases 553 846 IPR010255 GO:0004601|GO:0006979|GO:0020037
Alju12g1827 846 Gene3D Peroxidase, domain 2 688 829 - -
Alju12g1827 846 Gene3D Acid Proteases 88 285 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1827 Alju-ChrAlju12 39279649 39289018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1827 541 845 Peroxidase AT5G42180 65.686 1.60e-145 430