Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1820 ATGATGCAATCTATTTGTTATAACCAAAGAATTTCATATATCAAGGAGCAGTATCTGTCAAAACAGGGCACACATTATGCTGCCGATGACCATGATCAGGAAAGGATGGAACGCCTTCCTTGTTGCATTGAAATACCTTCTGATGGAGCTGATGTCTGGGAAATTAATACCAACCTGTTGAAATTTGAAGACAAAGTTGGCTCTGGATCATTCGGTGATTTGTACAAAGGCACATATTGCAGTCAAGTTGTGGCTATCAAAGTCCTCAAACCTGAGCGTACAAACACAGATATGTTGAGAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCGACCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTTTATGCACAAACAAAGAGGTGTATTTAAGCTTCCTTCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATACACAGGGACCTCAAGACCGCCAATCTGCTGATGGATGAAAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGAGGATACAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCTCCAGAGATCATTGAACACAAACCTTATGACCAGAAAGCAGATGTCTTCAGTTTTGGAATAACTCTTTGGGAGCTTCTAACCACAGAACTGCCTTACTCTTACTTGACTCCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGGTCTAAGACCTACAATCCCCAAGAGCACACACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCCGAATTCTCCGAAATAATAGAGATTCTTCAGCTGATAGCTAAAGAGGTTGTTGATGAAAAATCAAATAATCACAAAGATAAATCGCCCCACGGCTTTCTCTCAGCACTCAAATGGGGCCATCACTGA 1026 0.4152 MMQSICYNQRISYIKEQYLSKQGTHYAADDHDQERMERLPCCIEIPSDGADVWEINTNLLKFEDKVGSGSFGDLYKGTYCSQVVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTRPPNLCIVTEFMSRGSLYDFMHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVRIQSGVMTAETGTYRWMAPEIIEHKPYDQKADVFSFGITLWELLTTELPYSYLTPLQAAVGVVQKGLRPTIPKSTHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIAKEVVDEKSNNHKDKSPHGFLSALKWGHH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1820 341 FunFam Serine/threonine-protein kinase isoform 1 50 138 - -
Alju12g1820 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Alju12g1820 341 Gene3D Transferase(Phosphotransferase) domain 1 139 333 - -
Alju12g1820 341 ProSitePatterns Protein kinases ATP-binding region signature. 66 87 IPR017441 GO:0005524
Alju12g1820 341 SMART serkin_6 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1820 341 CDD STKc_MAP3K-like 66 309 - -
Alju12g1820 341 Pfam Protein tyrosine and serine/threonine kinase 60 309 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 SUPERFAMILY Protein kinase-like (PK-like) 45 309 IPR011009 -
Alju12g1820 341 ProSiteProfiles Protein kinase domain profile. 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1820 341 PRINTS Tyrosine kinase catalytic domain signature 217 227 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 PRINTS Tyrosine kinase catalytic domain signature 171 189 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 PRINTS Tyrosine kinase catalytic domain signature 134 147 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Alju12g1820 341 FunFam serine/threonine-protein kinase HT1 139 330 - -
Alju12g1820 341 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 317 - -
Alju12g1820 341 Gene3D Phosphorylase Kinase; domain 1 50 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1820 Alju-ChrAlju12 39230548 39233991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1820 9 340 MAP Kinase Kinase Kinase AT4G35780 71.386 1.22e-176 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju12g1820 PK_Tyr_Ser-Thr 1.5e-74 CL0016