Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1818 ATGGGATTACTACTGATTCGGACTGAGGTGGTGGGAACCCACTTGCTGGCTTCTACGGTGCTCTCTTCTCTTTCTCATTTTCTGCTTAGCAATTCAAAACCATTCATTCGCACTTCCCTTTCATTCTCAAGCTCTCAGGAACACCACCATCACAAAACCATGACGACGACGTCGCTTCGTACCTCCGGCTTCATTCTCTCTCCTTCTCTCTGCCCCCCTAGTCTGGATCATCACCTAAGAATCTCATTTCTGAAACCGTTGAACTCTCGTCAGGCCCGGAGCGTTAGAGTTGTTAGATCCAACTTTCCAAACTACCGCACGAAAGCTGCTGCGAACGGGAATTTGGACACCGTCGTAGTTCCGACGTCAGTGCCAGTGCGTGTAGCACACGAGCTGCTTCTTGCTGGCCATCGCTATTTGGATGTGAGAACTCCCGAAGAATTCCACGCAGGACACGCTCCAGGCGCAATTAACGTGCCATACATGTACAGATTAGGATCAGGTATGACAAAGAATGCCAATTTCATTGCAGAAGTCTCATCTCATTTTAGAAAGGATGATGAGATTATTGTCGGCTGTCAATTAGGAAAAAGGTCTATGATGGCTGCTACTGACTTATTAGCTGCTGGATTTTCTGCAATTACAGACATAGCTGGTGGATACGCTGCTTGGACTCAAAATGGACTTCCAACGGAACAGTGA 702 0.4744 MGLLLIRTEVVGTHLLASTVLSSLSHFLLSNSKPFIRTSLSFSSSQEHHHHKTMTTTSLRTSGFILSPSLCPPSLDHHLRISFLKPLNSRQARSVRVVRSNFPNYRTKAAANGNLDTVVVPTSVPVRVAHELLLAGHRYLDVRTPEEFHAGHAPGAINVPYMYRLGSGMTKNANFIAEVSSHFRKDDEIIVGCQLGKRSMMAATDLLAAGFSAITDIAGGYAAWTQNGLPTEQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1818 233 Pfam Rhodanese-like domain 139 226 IPR001763 -
Alju12g1818 233 ProSiteProfiles Rhodanese domain profile. 133 233 IPR001763 -
Alju12g1818 233 CDD RHOD 140 224 - -
Alju12g1818 233 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 58 232 - -
Alju12g1818 233 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 122 232 IPR036873 -
Alju12g1818 233 Gene3D - 110 232 IPR036873 -
Alju12g1818 233 SMART rhod_4 123 230 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1818 Alju-ChrAlju12 39222845 39225401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1818 123 230 Sulfurtransferasese or Rhodanese AT5G66170 46.364 3.46e-31 110