Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1810 ATGGCAGGCACTTCCCCTTGTGCTGCCTGCAAGTTGCTACGCCGCCGTTGTGCCACAGATTGCATCTTTGCTCCTTATTTCCCATCCGATCATCCTCAAAATTTTGCCGTCGTTCACAAGGTGTTTGGCGCTGGCAATGTCAACAAAATGTTGCAGCAGAGAAGATCACGAAACTATAAACTGATCATTGTTTTGGACAAACAGGAGCTTCCAGGTCATCAGAGAGCAGATGCAGTGAGCAGCTTAGTGTACGAAGCGAATGCTAGGGTGCGAGACCCAGTTTATGGCTGTGTTGGGGACATATCGCTTCTGCAGAATCAAGTGTCAGAGCTTCAAATGCAGCTCGCTCAGACTCAGGCACAGATCCCCTGCATCCATAATCATGAAGCTGTTAGGGGTGGAAAAGGCGAGGAGGCTTTTGAAACTGCTTCTGGTGTTGCTGCTGGAGAAGCTCCCGAGTCTTCTCATGCTGCGTCCAAACGTAAGAGGTTTACATTAGACCTCAATCAACTTCCTTCTGGGGAAGATGACCACATCATGCCTTAA 546 0.489 MAGTSPCAACKLLRRRCATDCIFAPYFPSDHPQNFAVVHKVFGAGNVNKMLQQRRSRNYKLIIVLDKQELPGHQRADAVSSLVYEANARVRDPVYGCVGDISLLQNQVSELQMQLAQTQAQIPCIHNHEAVRGGKGEEAFETASGVAAGEAPESSHAASKRKRFTLDLNQLPSGEDDHIMP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1810 181 Coils Coil 101 121 - -
Alju12g1810 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 147 - -
Alju12g1810 181 ProSiteProfiles LOB domain profile. 5 122 IPR004883 -
Alju12g1810 181 MobiDBLite consensus disorder prediction 139 181 - -
Alju12g1810 181 Pfam Lateral organ boundaries (LOB) domain 6 119 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1810 Alju-ChrAlju12 39162392 39163106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1810 3 125 AS2 family AT2G30130 70.732 6.70e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju12g1810 LOB 2e-35 No_clan