Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1808 ATGGGACCCTCTTGCGCTTCATGCAAGCTGCGTCGACGACGATGCGCCCCAGATTGCCTCTTTGCTCCTTATTTCCCCTCCGATGATCCTCAAAAGTTTTCCGTCGTCCACAAGGTCTTCGGTACCAGCAAAGTCAGAAAAAGGTTGCAGAGAAAACCACGAAACTATAAACTGATCATTGTTTTTGACAAACAGGAGCTTCCAGTTCGTCAGAGAAGAGACGCAGTGGGCAGCTTGGTGTACGAAGCGAATGCTAGGGTGCGAGACCCAGTGAATGGCTGTGTTGGGGAAGTTTCAGAGCTTAAAAAGCAGCTCGCTGTGGCTCAGGCACGCATCCAGAATCATGAAGCTGTTAAGGGTGGAAAAGGCAAGGGGGCTTTTGAAACTGCTCAAGAAAAAGAGCCTTCTGTTTTTGCTGCTGCTGGAGAGATGAAACATGAAGCTGCTGAGAGACGTATTCTGAAGTTTCCATTTGACCTCAACGAGCTTCCTTTTGATGAAGATGAAGATATTGTGACTTAA 522 0.477 MGPSCASCKLRRRRCAPDCLFAPYFPSDDPQKFSVVHKVFGTSKVRKRLQRKPRNYKLIIVFDKQELPVRQRRDAVGSLVYEANARVRDPVNGCVGEVSELKKQLAVAQARIQNHEAVKGGKGKGAFETAQEKEPSVFAAAGEMKHEAAERRILKFPFDLNELPFDEDEDIVT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1808 173 ProSiteProfiles LOB domain profile. 3 119 IPR004883 -
Alju12g1808 173 Coils Coil 98 118 - -
Alju12g1808 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 117 - -
Alju12g1808 173 Pfam Lateral organ boundaries (LOB) domain 4 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1808 Alju-ChrAlju12 39140679 39141357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1808 5 112 AS2 family AT2G30130 62.609 2.45e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju12g1808 LOB 2.7e-31 No_clan