Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1790 ATGGAAGGTGACGGTGCCGTTGATCATGCCGCTGCGAAATCGAAGGGCACTGGCGAAGTGAACATCAATATTCGTTGCTCCGATGAGTCTAAGTTTTCGGTTCAGATTAGTCTTGAATCCACCGTCGAATCATTTAGGGAAGCTATTGCTCAAAAGCGCGATATCTCACCCAATCAACTGCTGATTTACAAGGGTCGGGTCTTGAGGAAAGATCATAAAACCCTGAAAAGATACGGTTTGAAGGAAGGTGACACTGTTGATTTGGATGCAACAACCAATACCACTGGTGGGACCAAGGGCTCAACAAATAGTACCAGAAGTCCCAGCTTGACGAAAGACCCAAAAATGAATGCCACTATGATGGCAGGTGCTGGAACTCAAGCTGGACGTACCCAAAATAACACCACAGGGTCAACTAGTGGAGGGAATGCTCAGGCACCCACTGCCTTGGGACTTGATCCCACTTTCATCTCCCAGATAGTGCAGAACCCAAATTTTTATCTATTAAGGCATAGTATCCGTGCCAACCCGAGGGTAGCGATGCAGACCATTAAAGCAGATTTCGAGAAGCGTGGAATGCCTGAAATATCCTCTTATCTTATACTACTGGTGGCCCTACAACCAGTGGTATTTCAGCGAGTGCTTTTGTCTCAACTTGGCCAGCAACAATCAACTGAGGAATATGACAGAGCTACCGGTGTGCAAGACCTTATCAAAATGTTTTTATTAGCAGAAAATATGTCTCATGGACTTGGAACTGGTAGCCCAGCTGTTCCGAATAGCAACTCTGATGAGCCACCAGAGCAATTGTATGCAACCCAGCTCTCTCAACTTCAAGAAATGGGTTTCTCCGACACGCAAGAAAACATAAGGGCCCTTACCGCCATTTCCGGCTTTGTTCATGAGGTGGTCAAACTGCTTTCGGGGAACTCAGAAATGTACCCAAACTATAATGGTCAGAGCAGAGACGTTTGTATAGGTTTTGGACTGAAATCTGTCCTCCCACCTTGA 1011 0.4619 MEGDGAVDHAAAKSKGTGEVNINIRCSDESKFSVQISLESTVESFREAIAQKRDISPNQLLIYKGRVLRKDHKTLKRYGLKEGDTVDLDATTNTTGGTKGSTNSTRSPSLTKDPKMNATMMAGAGTQAGRTQNNTTGSTSGGNAQAPTALGLDPTFISQIVQNPNFYLLRHSIRANPRVAMQTIKADFEKRGMPEISSYLILLVALQPVVFQRVLLSQLGQQQSTEEYDRATGVQDLIKMFLLAENMSHGLGTGSPAVPNSNSDEPPEQLYATQLSQLQEMGFSDTQENIRALTAISGFVHEVVKLLSGNSEMYPNYNGQSRDVCIGFGLKSVLPP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1790 336 MobiDBLite consensus disorder prediction 86 147 - -
Alju12g1790 336 Gene3D - 6 99 - -
Alju12g1790 336 PANTHER UBIQUILIN 15 181 IPR015496 -
Alju12g1790 336 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 265 310 IPR015940 -
Alju12g1790 336 Pfam Ubiquitin family 22 88 IPR000626 GO:0005515
Alju12g1790 336 SUPERFAMILY UBA-like 267 307 IPR009060 GO:0005515
Alju12g1790 336 MobiDBLite consensus disorder prediction 124 146 - -
Alju12g1790 336 SMART ubq_7 20 91 IPR000626 GO:0005515
Alju12g1790 336 SUPERFAMILY Ubiquitin-like 17 89 IPR029071 -
Alju12g1790 336 ProSiteProfiles Ubiquitin domain profile. 20 88 IPR000626 GO:0005515
Alju12g1790 336 MobiDBLite consensus disorder prediction 87 114 - -
Alju12g1790 336 Gene3D - 256 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1790 Alju-ChrAlju12 38978550 38980794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2458 09 47471985 47477316 Alju12g1790 12 38978550 38980794 CCT
Alju12g1790 12 38978550 38980794 Alju12g1790 12 38978550 38980794 ECH