Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1787 ATGCAAAACCCTCACAAAGATTCCAAACCCAGCCCTAAATCTCCCTCCTCCCCTCCTCCTGACACCACTCAAATTGTCGCCGGTGATGTCACCGCAGCAAAACAAGGAGGAGGAAGTAGCGTGGGAGGTGTTGCTGCCAGCTCAGACATAGCAAGAATAGTCCAGGTGGTGGACCCCACTCCTGGCGGTGGTGGATCTCCGGGACTTTGGGGAGACTCTGGTGATGGTGGAGGTGGGTCCTACGCTGCGGTGGCGGCCAGTGTGGAGGGTGGTGGAGTGGTGGTGGTGGGAGGTGGGTCCTCGGCGGTGGCTTCAACGCTGCTGCCGGAGAAACAGGGGAATAAGCAGAAAAGGAAGTCGTCCCAAGTGTCAGATCCTCCGCCGTGGCCGCCGAAATGCAACGAGTGTGGGAAAGAGTTTCCGAGTTGGAAAGCTGCGTTTGGACACATGAGAGCACACCCTGAACGTGATTATCGAGGTTTCTTCAGACCTCCCACTTCTTCTTCTTCACCAAAGCAACGTGTTCGTCTAGGTGTGGAACAAGGTGGAGGAGATACGGGAGCATCATCAGCGGTGGCGGCTACCGGAGGGGTTGGGTTTGATCTGAATCAGCCGACGGAGGAGGAAGTGGAAGCTTCTGATACTGAAGCTGTACAGAGAAACCAAGCATCACTGCAATCTTCCTCTTCTTCGTCTGCAGTAAGGAGGAGTACTGATCAAGAGGAAAACAAAGTTGGGTTTGACCTAAACCAACTTCCTCCTTCTGAAGAAGACGATCATGATCAACACAAGAAGCCCTCATGTTAG 807 0.5403 MQNPHKDSKPSPKSPSSPPPDTTQIVAGDVTAAKQGGGSSVGGVAASSDIARIVQVVDPTPGGGGSPGLWGDSGDGGGGSYAAVAASVEGGGVVVVGGGSSAVASTLLPEKQGNKQKRKSSQVSDPPPWPPKCNECGKEFPSWKAAFGHMRAHPERDYRGFFRPPTSSSSPKQRVRLGVEQGGGDTGASSAVAATGGVGFDLNQPTEEEVEASDTEAVQRNQASLQSSSSSSAVRRSTDQEENKVGFDLNQLPPSEEDDHDQHKKPSC 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1787 268 MobiDBLite consensus disorder prediction 156 268 - -
Alju12g1787 268 MobiDBLite consensus disorder prediction 106 133 - -
Alju12g1787 268 MobiDBLite consensus disorder prediction 216 236 - -
Alju12g1787 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Alju12g1787 268 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Alju12g1787 268 MobiDBLite consensus disorder prediction 253 268 - -
Alju12g1787 268 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 99 170 - -
Alju12g1787 268 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1787 Alju-ChrAlju12 38935960 38937006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1787 133 170 C2H2 Transcription Factor Family AT4G35280 58.140 9.00e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju12g1787 zf-C2H2_6 1.3e-05 CL0361