Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1782 ATGGGTCTCTGCTTCGGTTCTCTCGCTTCCCGTGGTCACGATTTTAGCGCCAAAAGACCTCATAATTCAGGATCAGCGAGTTCTGAGAGTAGGAATGTTGAGTCATTTACAACAAACAGCACTGTGGAGAAGAGCCAATTCTCGATGATTGCTAATGGAAGCGTCGATGGGTCCTATGCTTCTCCAAGTCGGCATGTTATAGAAATGTCTCATTTCTTGAAGGTTTTCAGTCTTGGCGATTTGAAAGCAGCCACCAAGAACTTTAAATCGGATTCATTGCTCGGAGAGGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAAGACGCTTTTGCCGGCCAAAGCCGGCTCTGGAATGATGGTTGCTATAAAAAAACTCAATCCTGAGAGTATGCAAGGCTTTCAAGAGTGGCAGTCAGAAGTGAACTTCTTAGGCACCCTTTCTCACCCGAACCTGGTCAAGCTATTTGGTTACTGCATGGAGGACGGTGAACTTCTCCTTGTGTATGAGTTCATGCCTAAGGGAAGCTTGGAGAGCCATCTCTTCAGAAGGGTTTCTAACATGGAACCGCTTTCTTGGAACACACGACTCAAAATAGCTATTGATGCAGCTCAAGGCCTGGCTTTCTTGCATACTTCAGAAAAGCAAATCATATACAGAGATTTCAAGGCCTCAAATATATTACTTGATGTGAGTTACAATGCAAAAATTTCTGATTTTGGCTTGGCCAAATTAGGGCCTACTGGAGAACAATCACATGTGACTACCAGGATCATGGGCACATACGGTTATGCTGCCCCAGAATACGTAGCCACAGGGCACTTGTATGTGAAGAGTGATGTGTATGGGTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGTTTGAAAGCACTTGATCCAAAGAGGCCATCTGGGCAGCATAATCTGGCTGAGTGGGGTAAGCCATATCTCACCAGAAAAAAGAAGTTGAAAGCCATAATGGACGCCAGAATAGAGGGCCAATATTCACTCAGTGCCGCATTTCAGGCTGGTCAGCTTATTCTCAAGTGCCTACTACCTGACCCCAAGAATCGCCCTAGTATGAAGGAGGTAGTGGATGCATTGCAAGATATTGAAGCTACCCAAAACAAGTCAAAAGATTCCAAGAAAAGCTACCAATCTTCACCTCTTCATCATCATAAGAAGCCGATTCATCACCGATCAGTTCATGATGGCCATAGAAGCTTCAATCAATGA 1242 0.4469 MGLCFGSLASRGHDFSAKRPHNSGSASSESRNVESFTTNSTVEKSQFSMIANGSVDGSYASPSRHVIEMSHFLKVFSLGDLKAATKNFKSDSLLGEGGFGKVYKGWLDEKTLLPAKAGSGMMVAIKKLNPESMQGFQEWQSEVNFLGTLSHPNLVKLFGYCMEDGELLLVYEFMPKGSLESHLFRRVSNMEPLSWNTRLKIAIDAAQGLAFLHTSEKQIIYRDFKASNILLDVSYNAKISDFGLAKLGPTGEQSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLKALDPKRPSGQHNLAEWGKPYLTRKKKLKAIMDARIEGQYSLSAAFQAGQLILKCLLPDPKNRPSMKEVVDALQDIEATQNKSKDSKKSYQSSPLHHHKKPIHHRSVHDGHRSFNQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1782 413 CDD STKc_IRAK 94 373 - -
Alju12g1782 413 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Alju12g1782 413 FunFam Serine/threonine-protein kinase BIK1 56 173 - -
Alju12g1782 413 Pfam Protein tyrosine and serine/threonine kinase 91 370 IPR001245 GO:0004672|GO:0006468
Alju12g1782 413 MobiDBLite consensus disorder prediction 16 39 - -
Alju12g1782 413 PANTHER OS01G0588500 PROTEIN-RELATED 38 374 - -
Alju12g1782 413 MobiDBLite consensus disorder prediction 372 413 - -
Alju12g1782 413 Gene3D Transferase(Phosphotransferase) domain 1 174 404 - -
Alju12g1782 413 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1782 413 MobiDBLite consensus disorder prediction 390 404 - -
Alju12g1782 413 SUPERFAMILY Protein kinase-like (PK-like) 64 370 IPR011009 -
Alju12g1782 413 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Alju12g1782 413 MobiDBLite consensus disorder prediction 375 389 - -
Alju12g1782 413 FunFam Serine/threonine-protein kinase PBS1 174 389 - -
Alju12g1782 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Alju12g1782 413 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1782 Alju-ChrAlju12 38906654 38910172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1782 74 370 Glycoside Hydrolase AT3G07070 48.658 2.83e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju12g1782 PK_Tyr_Ser-Thr 3.1e-48 CL0016