Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1768 ATGGCTCTTGCTGGCACCGATTTCTTGCCTCATCAGACTTCGGCCACGATGACAACTAGTGACAACGATGTAGGTCGTCCAATAATCATGGAAGATCCTAATAATAATAATAATAACAATAATGGCCACACTAATCATAACTCTTGTACCACTACTGCTACCACGACTGGCAGGCCTCCTAGAGACGTTTCCTCTATGCGTCATTGCACTAACTCGGAAGCAGATATTGCGAGCATAGAATGGAAAACACCCACGACGACGACTACTACGACAACAGCATCAGCGACGACGACGGAGGAAAAGTCGGAGTTTTCGCCTGTATTCAGATCAGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAAGATGAGTTCATCGCTGTTGATACTCTCCATGAACATCTTCCTCCATCAGCAACTCACCTTCCTTCTTCTGCCGCATTTTACGGGATATTTGATGGGCACGGAGGTACAGATGCGGCATTATTTACGAGAGACAACATCCTAAAGTTTATAACGTCGGACTCACAATTCCCTGGCAGCATGAAAAAGGCCATAAGGAGTGCCTTTGTGAAGGTTGATCACGCCTTAGCTGATGCCGTTTCTCTTGATAAATCTTCTGGCACCACTGCTTTAATTGCCCTCATGCTCGGAAGGAGCATGATGATAGCCAATATAGGCGATTCTCGAGCTGTGTTGGGAAAACGAGGAAGAGCCATAGAACTATCCAAAGACCACAAGCCAAACTGCACTTCGGAGAGGTTAAGGATTGAGAAACTGGGAGGCGTAATCTACGACGGATACCTGAACGGCCAACTGTCAGTGGCAAGAGCTCTAGGAGACTGGCACATAAAAGGGTCAAAAGGATCAAAGAGCCCATTAATCTCAGAACCAGAGCTTGAAGAACTGGTTCTAACACAAGACGACGAGTACTTAATAATGGGTTGTGACGGTTTATGGGACGTGATGAGCAGCCAGTGCGCTGTTTCGACGGTGAGGAAGGAGCTGATGCAACACAACGATCCAGCAAGGTGTGCAAAAGCACTTGTCACCGAAGCGTTACAACGTAATACATGCGACAATTTAACTGTTGTTGTTGTCTGTTTCTCACAACATCCTCCTCCTAAGCTTCAAGTTCCTGTGTTGCATAAGAGGAGGAGCATTTCAGCTGAAGGCTTGGATCTTCTTAAGGGTGTCCTCTCTTGA 1209 0.4648 MALAGTDFLPHQTSATMTTSDNDVGRPIIMEDPNNNNNNNNGHTNHNSCTTTATTTGRPPRDVSSMRHCTNSEADIASIEWKTPTTTTTTTTASATTTEEKSEFSPVFRSGSCSEKGPKQYMEDEFIAVDTLHEHLPPSATHLPSSAAFYGIFDGHGGTDAALFTRDNILKFITSDSQFPGSMKKAIRSAFVKVDHALADAVSLDKSSGTTALIALMLGRSMMIANIGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPELEELVLTQDDEYLIMGCDGLWDVMSSQCAVSTVRKELMQHNDPARCAKALVTEALQRNTCDNLTVVVVCFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1768 402 MobiDBLite consensus disorder prediction 86 115 - -
Alju12g1768 402 PANTHER PROTEIN PHOSPHATASE 2C 94 368 IPR015655 GO:0004722|GO:0006470
Alju12g1768 402 MobiDBLite consensus disorder prediction 9 23 - -
Alju12g1768 402 MobiDBLite consensus disorder prediction 31 66 - -
Alju12g1768 402 FunFam Probable protein phosphatase 2C 22 92 373 - -
Alju12g1768 402 Gene3D - 86 374 IPR036457 -
Alju12g1768 402 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Alju12g1768 402 MobiDBLite consensus disorder prediction 1 66 - -
Alju12g1768 402 ProSiteProfiles PPM-type phosphatase domain profile. 109 370 IPR001932 -
Alju12g1768 402 SMART PP2C_SIG_2 133 370 IPR001932 -
Alju12g1768 402 MobiDBLite consensus disorder prediction 86 109 - -
Alju12g1768 402 SUPERFAMILY PP2C-like 101 372 IPR036457 -
Alju12g1768 402 Pfam Protein phosphatase 2C 110 362 IPR001932 -
Alju12g1768 402 CDD PP2Cc 108 370 IPR001932 -
Alju12g1768 402 SMART PP2C_4 99 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1768 Alju-ChrAlju12 38815987 38818686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1768 102 402 PP2C-type Phosphatase Gene Family AT3G51470 76.412 3.45e-172 482