Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1767 ATGGTTGCTAGAGCTAGAGCTCTGGCCACTGGTATGACATCAAAGGGTTTCATGTTACCTCATTTTGACATATTCATAAAACAACAATTAGCTGTTTCAGCCTCGAAGCATAAGGAAGGAAAAAAGCATTTCATTTCATTTCATCTATCTCTTAGCTTTCAACTTTCACCTTCTTATTTAGAGCCAAAAGAAAGACAAAAAAAAAAGCAGATCATGCAGAGAATATGGCTTCTTATTGTTCTTATGATTTTCTACTGCGGCATTTATTCAAACGGATTAAGTGGTGTTCCTCCAAGACCCAACTCTGTCAACATTGGGGCAATTCTATCCTTCAATTCAACCATTGGCAAAGTTGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCCAATCCATCAGTTCTTAACGGAACTAAACTCAATGTTTCATTCCAAGACACCAAACTGTCCACTGGTTTTCTCGGCATCATTGATTCATTATTACTGATGGAGAATAACACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCATGTGATTTCACACATAGCCAATGAACTACAGGTACCCTTACTATCATTTGCAGCAACAGACCCTACCCTGACTTCCCTTCAGTTCCCATATTTTGTCAGGACAACACAGAGTGATCAGTTTCAGATGGCCGCTGTGGCAGATATCGTCGGCTACTATCAATGGAGGGATGTGATAGCAATCTACATTGATGATGATCATGGAAGAAATGGGATAGTTGCATTAGAAGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTAGGCCTAACAACATAAACAGAGAAGAAATAAACAATGCTTTAGTTAAGGTTGTTATAAGGGAGTCAAAGGTTATAGTCCTCCACATATACCCTAGTTTTGGTCTAGATGTGCTTAAGATGGCTAATTCACTAAACATGTTGGGAAATGGCTATGTCTGGTTGGCCACTGATTGGCTTTCTACGGTTCTAGATACCGATCCATCTCAGTCATCCTCATACATGAATGACCTCCAAGGTGTTATAACCTTGAGACTGTACACACCAGATTCTGGGATGAAAAAGAATTTCACTTCCAGGTGGGGTAACTTGGTAACTAAGAAAGCTCCTGATCAGAGTCCTTTCATGTGGAACCCTTATGCCCTTTATGCCTATGACACTGTTTGGGTCCTTGCATATGCACTTGACTCATTTTTCAATAGTGGAGGGACTTTATCATTTACAAATGATTCAAGCCTGAACAAACTAATAGGTGATAGACTGGACCTAAATTCTGTAGGGGTCTTTGCTAATGGTAGCTTATTGTTGGAAGAAATTACGAAGGTCAATAAAACTGGCTTAACAGGTCAAATCATGTTCAGTCCAGATGGTGAACTTATGAATCCTTCTTATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCAAATTCCTCTGGTTTATACACTGGACAAGCACCTGGTCATTCAAACTCAAGGAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTGCAACGCCTCGCGGCTGGGTTTTCGCCAGCGATGGAAAGCCTTTGAGAATTGGGGTGCCTCTTAGGATCAGTTACCATGAGCTCGTGTCGAGGATCGAAGGATCTGAAATGTTTGGAGGTTATTGTGTTGATGTGTTCAAAGCTGCAGTTGACTTGTTGCCTTATCCAGTTCCATACAAGTTTGTCCCTTTTGGAGATGGTAAAACTAACCCCTTAAACTCAGAACTTCTGCACGAAATCACAACCAGTGAGTTTGATGCTGTGGTAGGTGATATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAATCTGGGCTTGTTGTTGTGGCTCCTATTAGAAAATCAAACTCTAATGCTTGGGCTTTCCTAAGACCATTCACTCCAATGATGTGGTTTGTGACTGGAATGTCTTTCTTTTTTGTGGGAGCAGTTGTGTGGATTTTAGAACGGCGAGTAAATGATGATTTTAGAGGTCCCCCTAGAAGACAGTTTGTGACCATTATATGGTTTAGTTTTTCAACCCTGTTTTTTGCACATAGAGAGAGAACCTTGAGCACTTTGGGTCGCTTAGTGCTGATAATATGGCTATTTGTAGTTCTGATATTGAACTCCAGCTACATAGCAAGCCTGACCTCCATACTCACAGTGGAACAGCTTTCTTCACCTGTGAAAGGAATTGAAAGCTTAGCGACAAGCAAAGAACTCATTGGCTATTTGAGAGGTTCATTTGCAGAGAACTACCTCACTGACGAACTCAACATTATGAAATCAAGGCTTGTGCCCTTGAATTCTCCTTCAGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATAATTGATGAACGTGCTTACATGGAGCTCTTTCTTTCAACAAGATGTGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCGAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATCTTGAAGCTATCAGAGAATGGTGATCTTCAGAGAATACATGACAAATGGCTTTCAAGAAGTGCATGCAGTTCGGAAGGGTCAAAGCAAGGCATAGACAGATTAGAGCTAAAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCACTGCCTGTTTCATAGCTCTCTTTTGTTATGTCCTTCGCATGGCCTACCGTTTCAGCCGCCACTCCGACTCCAACCTCGCCGGCTCATCCCACTCGGCTCGGTTCCGGTCATTTATTTCCTTTGTCAATGAAAAGGAAGATGAAGGGAAAAACTGCAACAAGCCAAAGAGAAGCAGAAAAGTAGTGCATGAAGATGGGTCAACAATGGATGGCTCCAATATTGACATTGGTGGTGTTCATTATGAAAATGATTCTTCCCAATGTTAA 2991 0.4146 MVARARALATGMTSKGFMLPHFDIFIKQQLAVSASKHKEGKKHFISFHLSLSFQLSPSYLEPKERQKKKQIMQRIWLLIVLMIFYCGIYSNGLSGVPPRPNSVNIGAILSFNSTIGKVAKVAIDAAKDDINSNPSVLNGTKLNVSFQDTKLSTGFLGIIDSLLLMENNTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTTQSDQFQMAAVADIVGYYQWRDVIAIYIDDDHGRNGIVALEDKLAEKRCKISYKAPLRPNNINREEINNALVKVVIRESKVIVLHIYPSFGLDVLKMANSLNMLGNGYVWLATDWLSTVLDTDPSQSSSYMNDLQGVITLRLYTPDSGMKKNFTSRWGNLVTKKAPDQSPFMWNPYALYAYDTVWVLAYALDSFFNSGGTLSFTNDSSLNKLIGDRLDLNSVGVFANGSLLLEEITKVNKTGLTGQIMFSPDGELMNPSYEIINVIGTGVRRIGFWSNSSGLYTGQAPGHSNSRKGLYGVIWPGQTTATPRGWVFASDGKPLRIGVPLRISYHELVSRIEGSEMFGGYCVDVFKAAVDLLPYPVPYKFVPFGDGKTNPLNSELLHEITTSEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFFVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLATSKELIGYLRGSFAENYLTDELNIMKSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELKSFWGLFLLCGTACFIALFCYVLRMAYRFSRHSDSNLAGSSHSARFRSFISFVNEKEDEGKNCNKPKRSRKVVHEDGSTMDGSNIDIGGVHYENDSSQC 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1767 996 Gene3D - 219 498 - -
Alju12g1767 996 FunFam Glutamate receptor 775 882 - -
Alju12g1767 996 Gene3D - 121 473 - -
Alju12g1767 996 FunFam Glutamate receptor 533 649 - -
Alju12g1767 996 CDD PBP1_GABAb_receptor_plant 104 498 IPR044440 -
Alju12g1767 996 Gene3D - 531 648 - -
Alju12g1767 996 Pfam Receptor family ligand binding region 121 483 IPR001828 -
Alju12g1767 996 Gene3D - 800 885 - -
Alju12g1767 996 Gene3D - 649 785 - -
Alju12g1767 996 Pfam Ligand-gated ion channel 880 910 IPR001320 GO:0015276|GO:0016020
Alju12g1767 996 PIRSF IGluLR_plant 69 990 IPR017103 -
Alju12g1767 996 SMART GluR_14 539 880 IPR001320 GO:0015276|GO:0016020
Alju12g1767 996 CDD GluR_Plant 536 878 - -
Alju12g1767 996 FunFam Glutamate receptor 649 779 - -
Alju12g1767 996 MobiDBLite consensus disorder prediction 955 981 - -
Alju12g1767 996 SUPERFAMILY Periplasmic binding protein-like I 99 529 IPR028082 -
Alju12g1767 996 MobiDBLite consensus disorder prediction 955 974 - -
Alju12g1767 996 FunFam Glutamate receptor 219 375 - -
Alju12g1767 996 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 103 942 IPR015683 -
Alju12g1767 996 Pfam Bacterial extracellular solute-binding proteins, family 3 563 879 IPR001638 -
Alju12g1767 996 SUPERFAMILY Periplasmic binding protein-like II 514 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1767 Alju-ChrAlju12 38798031 38803771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1767 72 976 Ion Channels AT1G42540 56.695 0.0 1057