Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1765 ATGGTGTATGGACGTTGGTTTCCCAGGTCAAGATTTCGGTCAGAGAATCAACTGGTAGTCTCTAAGGCTGAAAATACTCTTTTGGACTCAAAAAAATCTGAGTTACCCGGATATGCTGTTTTAAATACCTCTAAAGGCTCTATAATAATAGAACTTTACAAGGAAACTTCCCCTGAAGTTGTAGATGAATTCATTGACTTATGTCAAAAGGGGCACTTCAAGGGAATGCATTTCCATCATGTAATCAAGCACTTTGTGATTCAAGCTGGAGAAAACGAAGGGAAAGGACATTCCATAGATTGGAGTGTGAGAGGAAAGCACACAACCAGTGTGAAGCATGAAGCCTTCATGCTTGGAACTTCCATGGGGAAACATACAAACAAGGGATTTGATCTTTTCATTACAACTGCACCTATACCAGACCTTAATGAGAAGCTTATTGTGTTTGGGCGGGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTTCCAGCCAAAATTCCCTATTAAAATGCTTGACGTGACACTTCAACAGAAGATCTGA 567 0.4021 MVYGRWFPRSRFRSENQLVVSKAENTLLDSKKSELPGYAVLNTSKGSIIIELYKETSPEVVDEFIDLCQKGHFKGMHFHHVIKHFVIQAGENEGKGHSIDWSVRGKHTTSVKHEAFMLGTSMGKHTNKGFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQEIEEVDTDEHFQPKFPIKMLDVTLQQKI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1765 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 52 67 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 90 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 143 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 CDD cyclophilin 40 178 - -
Alju12g1765 188 Gene3D - 23 188 IPR029000 -
Alju12g1765 188 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 40 182 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 184 IPR002130 GO:0000413|GO:0003755
Alju12g1765 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 2 188 - -
Alju12g1765 188 SUPERFAMILY Cyclophilin-like 36 184 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1765 Alju-ChrAlju12 38782880 38786083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1765 37 184 U-box Gene Family AT5G67530 31.169 2.17e-17 77.4