Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1764 ATGGGGGATGAAGAAAGTGGAGGGAATTCAGTGGCAACATCTTCAGCGACGCCATTAGTAAACTGGTGGGATGTTCATGCAACTTCTTCACTCTCTTCCTGGAACACTACTCTTCATTCTAATTCCTCCTCATGTTGTGAAGATCATCATCTTTCTGCGCCTTCTTCAGACAATAATCACCTTTGGACTCACGTCTTACTAGGTGTGGGAAGCAACGAGGAGGTACAAAATAGTGGAGAGACGAACTTGATGGAAGATGTGTCATGTAAAAGCATCATGTACGAACCTGCCTGCAACTACTTGAAGCAACTTGATACCACCTGGGATTACAACCATCACAACAATCATTCTTCTTCTTCATCAATCAACAATACCAACACTACTACTACTTTTTATCACAGACACTTGCATAATGATAATAACAATGGTTTCAACGATGAGTCCGCGATTCTGGAGAGTGATGAGAGATTGAACAAGCTGGTCACCACTTGGTCCATTGCGCCCCCTCACCAAACTAATCATAATACCAATACCACACACTTTGATCCTTCTCATAATGATAATACTGATCATGTAACTTTGAGCTCTTGTATGGATCATTCTGGGGTGTTTTCTTCGTATGCTGCTCTTGACATGAAGGTTAACCAAGATCATCATCATCATCATCAACATGCAAGCTTAAGTGAGGGTTTATTTGGATATCATCAGAATAATAATAGTAATAATGGATTTAATAATAACAGTAGTCATCATCATCAGAATTGGCCGGCCAGAAATTGGACTGATGTTATATCTTTTACGGGGAGGATTGGCCGGCCAATCATCGGAATTCATGCACTCAAACCCAGTTTCAGACCACCCTCGTCGTCCTTGATGACTACTACTGTCTCTGATCACTCCAAGAAGCAGCTTTTTCACACATCATCATTGCCGACAAGGGCAAGCAATGGAAGACGACAAGGGAGCTCCACTACTGAGGTAAAGAAGAAAAGAACTGATGACTCATCCTCACAAGCTATCTTGAAGAAGCCAAAGCAAGATACTTCGTCTACCGCTTCTTCTACAAAGGTGCAAGCCCCAAAAGTCAAGCTAGGCGACAGGATTACAACCCTTCAGCAAATTGTGTCGCCATTTGGAAAGACAGACACCGCATCGGTGCTTTTTGAAGCAATTGGGTACATAAAGTTTTTACAAGAACAAGTGCAGCTACTGAGCAACTCTTACATGAAGACTAACTCTCACAGGGAAACAACATGGGGAATCATGGAGACAAAAGAGGAGAAGGGAGACTTAAAGAGCAGAGGCCTTTGTTTGGTTCCAATTTCATGGACTCCTCAGTCTTACAGAGACAATTCTACCCCTGATTACTGGACTCCCGCTTACCGAGGTTGCTTGTTTAGGTAG 1404 0.4266 MGDEESGGNSVATSSATPLVNWWDVHATSSLSSWNTTLHSNSSSCCEDHHLSAPSSDNNHLWTHVLLGVGSNEEVQNSGETNLMEDVSCKSIMYEPACNYLKQLDTTWDYNHHNNHSSSSSINNTNTTTTFYHRHLHNDNNNGFNDESAILESDERLNKLVTTWSIAPPHQTNHNTNTTHFDPSHNDNTDHVTLSSCMDHSGVFSSYAALDMKVNQDHHHHHQHASLSEGLFGYHQNNNSNNGFNNNSSHHHQNWPARNWTDVISFTGRIGRPIIGIHALKPSFRPPSSSLMTTTVSDHSKKQLFHTSSLPTRASNGRRQGSSTTEVKKKRTDDSSSQAILKKPKQDTSSTASSTKVQAPKVKLGDRITTLQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNSYMKTNSHRETTWGIMETKEEKGDLKSRGLCLVPISWTPQSYRDNSTPDYWTPAYRGCLFR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1764 467 Gene3D - 361 418 IPR036638 GO:0046983
Alju12g1764 467 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 363 413 IPR036638 GO:0046983
Alju12g1764 467 MobiDBLite consensus disorder prediction 280 359 - -
Alju12g1764 467 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 159 446 - -
Alju12g1764 467 MobiDBLite consensus disorder prediction 286 322 - -
Alju12g1764 467 CDD bHLH_AtbHLH_like 363 405 IPR045239 -
Alju12g1764 467 MobiDBLite consensus disorder prediction 232 252 - -
Alju12g1764 467 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
Alju12g1764 467 MobiDBLite consensus disorder prediction 323 340 - -
Alju12g1764 467 MobiDBLite consensus disorder prediction 341 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1764 Alju-ChrAlju12 38771059 38774098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1764 105 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 35.620 6.52e-36 135