Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1760 ATGCACACACCCAAGATTCATGTCACTGCTGTGGGTTTTGTAATTGTTGTAATATTCTTCTTCCCCCTCTGCTTGGAACTACTTTGCCTTATCAAATCTCGCTTCTCATTCATTTCACCAGCTGCAGAGCTGGTCCGAATTTCGGCTGGAGAGCTTTCTCTCTTCTACTCGACCGAACGGAACCTCCTTTTTTTCGCTGTTCTGTGCTCTGCTCATCCATCAAATTGGGCTGCACATCAAGACTACCACCATCTTCGTTCACTGGTTGTTTTCGCTTCTGAGATCCGCGCGGCTGACCGTTATAGTTCTGACGCCTTCGCTCTTCAGCTTTGTTTGCGAAAAATGGCGAGGATTAAACCTCAAGCTCTCCTACAGCAAAGCAAGAGGAAAAAGGGGCCTTCTCGAATAAGTGCCACAACTATTATATTTTACAGCTTGATTATTGTCTTGGTTGTGTTTTTCCTGTTCAGTGCGTACAAGCATTGGTCCCACAGGTCAAGATTTTCATCAGAGAATCAAATTGCAATCTCCCAGGCTGAAAATTCTTTTGGAGACTCAAAAAAGTCTGACCTGCCGGGATATGCTGTTTTAAATACCTCTAAAGGCTCCATAGTAATTGAACTTTACAAAGAAAGTGCTCCTGAAGTTGTTGACGAATTTATTGACTTATGTCAAAAAGGGCAATTCAAGGGAATGCTTTTCCACCATGTAATTAAGCACTATGTGATTCAGGCAGGGGAGAACCAAGGGACTGGAGCTACTGAAGATTGGAACCTGAGAGGAAAACGCTATACTAGTATGAAGCATGAAGCATTCATGCTTGGGACTTCCAAGGGCAAACACTTGAACAAAAAATTTGATCTTTTCATTACAACTGCACCAATACCAGATCTAAATGAGAAGCTTATTATATTTGGCCGAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACACTTCCAGCCTAAAATTTCTATTGGAATACTTGATGTGACGCTCAAACAGAAGATCTGA 1035 0.4222 MHTPKIHVTAVGFVIVVIFFFPLCLELLCLIKSRFSFISPAAELVRISAGELSLFYSTERNLLFFAVLCSAHPSNWAAHQDYHHLRSLVVFASEIRAADRYSSDAFALQLCLRKMARIKPQALLQQSKRKKGPSRISATTIIFYSLIIVLVVFFLFSAYKHWSHRSRFSSENQIAISQAENSFGDSKKSDLPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGQFKGMLFHHVIKHYVIQAGENQGTGATEDWNLRGKRYTSMKHEAFMLGTSKGKHLNKKFDLFITTAPIPDLNEKLIIFGRVIKGEDVVQEIEEVDTDEHFQPKISIGILDVTLKQKI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1760 344 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 300 315 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 223 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 234 246 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 287 299 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 SUPERFAMILY Cyclophilin-like 191 340 IPR029000 -
Alju12g1760 344 CDD cyclophilin 196 337 - -
Alju12g1760 344 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 196 338 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 115 344 - -
Alju12g1760 344 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 191 340 IPR002130 GO:0000413|GO:0003755
Alju12g1760 344 FunFam Peptidyl-prolyl cis-trans isomerase 181 344 - -
Alju12g1760 344 Gene3D - 180 344 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1760 Alju-ChrAlju12 38737360 38743711 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1760 193 340 U-box Gene Family AT5G67530 28.387 2.11e-14 72.4