Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1754 ATGGCATTGACTGCTCCAAACCCCCTTTTGAGGGTGGAGGAAATACAAGGGAGAGGAAGGGGAATGGTTGCTTCTCAACCTCTTAAAGCTGGCCAAGTTGTTCTCAGAGATTCTCCTATCCTGCTGTATTCTGCTTTGCCTTTGATCCCACAGTCATCATCCACCTCCTCTTCTCCAGTCTTTTGTGACCACTGTTTCAGAACCCTACCAGGGCCATCTTCAACGGGCTGTCCTTCATCTTCCTCGGTTTCTTGCCCTTCTTGTTGCCACCATCGTTTTTGTAGCCCAAAATGTCTATCCATTGCTCAAAATACATCCCACACTTCTTGGGTATGTAAAGCATTATCTCATCTCCGAGTCAACCCTGCACTTTTTGAACTGCCCCTTGAGTGTCAAGTCCAAGTGAATTTTCTCATTGCTGCCTACAATCTCGCCAATGTCTCCCCGTCAAACTTCCAATCTTTGCTTTCTCTTCATGGTCCTCCTGATGACACTACAGTTTCTGTAGCTCAGTTCCTGCACTCCCTTATAACGCCCCTCTCTCCGTTCACTTCAACCAGTCATCAGAATGGGTTTTCCTTGGAACTCACTGCAGCCCTGTTGGCCAAGGATAAGCTCAATGCTTTTGGCTTGATGCAACCATTCTCTGAAGATAATGACCAGAGATCTGTCAGAGCTTATGGTATATACCCTCATGTCTCCTTCTTTAACCATGATTGCCTTCCTAATGCCTGCAGATTTGATTATGTGGATACTAGTTCAACAGATGACGACCATAACACTGACATTATCATTAGGATGATTCATGATGTTCCTGAAGGTAGGGAGGTCTGTTTGAGCTATTTCCCTGTGAATGAAAATTATTCTAGTAGGCAGAAAAGACTGGCTGAAGACTATGGCTTCACCTGTAAGTGTGATCGATGTAATGTTGAAGCAAATTGGTCAGATAACGAGAGTGTTGAGGATGATGGTGCAGAGGATATTGAAGAGGCAATGGATGAGGATGAATGTGAAAATATGGCAGCGTCGGACACTGAAAGTAATACGCAAGGAGATAACAGTGATTTTCCCCATGCATATTTCTTTTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACCCCCACAGGGTAATACTCTATCCAATGTTATGGAATGTAATGTCTGCGGCAACTTGAAGAGTGACAATGTCCTTGATAGTGATGGAGGACAAGATGGAGTTTCCATGGAGTACTGA 1254 0.441 MALTAPNPLLRVEEIQGRGRGMVASQPLKAGQVVLRDSPILLYSALPLIPQSSSTSSSPVFCDHCFRTLPGPSSTGCPSSSSVSCPSCCHHRFCSPKCLSIAQNTSHTSWVCKALSHLRVNPALFELPLECQVQVNFLIAAYNLANVSPSNFQSLLSLHGPPDDTTVSVAQFLHSLITPLSPFTSTSHQNGFSLELTAALLAKDKLNAFGLMQPFSEDNDQRSVRAYGIYPHVSFFNHDCLPNACRFDYVDTSSTDDDHNTDIIIRMIHDVPEGREVCLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNVEANWSDNESVEDDGAEDIEEAMDEDECENMAASDTESNTQGDNSDFPHAYFFLKFMCDRKNCWGTLAPLPPQGNTLSNVMECNVCGNLKSDNVLDSDGGQDGVSMEY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1754 417 SMART set_7 8 288 IPR001214 GO:0005515
Alju12g1754 417 CDD SET_SMYD 206 308 - -
Alju12g1754 417 Gene3D - 126 208 - -
Alju12g1754 417 Pfam SET domain 19 281 IPR001214 GO:0005515
Alju12g1754 417 MobiDBLite consensus disorder prediction 332 351 - -
Alju12g1754 417 Gene3D SET domain 21 308 IPR046341 -
Alju12g1754 417 ProSiteProfiles SET domain profile. 8 282 IPR001214 GO:0005515
Alju12g1754 417 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 407 IPR044238 -
Alju12g1754 417 Gene3D - 61 121 - -
Alju12g1754 417 SUPERFAMILY SET domain 7 304 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1754 Alju-ChrAlju12 38676853 38678106 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju12g1754 SET 9.8e-10 No_clan