Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1732 ATGCTTTGGCTAATTACTCTGTTATGGAGCTTAACTGGCCATGTTTTGAGATTAGAGAGCTCCCAAGTCTCGCTTGTTGATCATACTGACCAAAGCTTTAATGGCTTACACCCACCTTTGAGCCGTCTAAGCCGATCTATTTTGTCCCTTTCACATAAGCCCAATACGACACTTGTTGCTACCCTAGATGGGACAATGTACTTGGTAGAGGTTGGTTCTATGAGGGTAATATGGTCATTTCCTTCTGGATCACCAATCTACCGCTCATATCAAGCTCCTCTCAATAAGGACGGTGTTAAAGAAAATGTGTGTGGATTAGCCAGCGGGTTCTTGGAATGTGGAGATGACTGGGCACTATATATCCAAAGCGAGCACTTTGGTAAAATGCAACTCTCAACATCTGTGGCAGACTTTGTTGCAGCTACACCTACCTTTTCAGATGATGGAGGTGTTATTCTTGGATCCAAAAGAAGTACTTTGTTTGAAGTTGATGCTATAAATGGAGAGCTCATTCGAAGCTATGCTGCTGATAATCTTTCTGCTCTGTGGAGTAATGAAATGCATAGTGCAACAAATATTGTTGGTACAAAGAATAAAGAGCTGGCTGGTCCTGCAATGCGAAGCACACCGGAGCTTCTGCTTAAAATAATTAGAACAGATTATTCTCTACAGGGTGTAAGTCCTAGATCTGGAAAAGTTTTGTGGACTATGAATGTTGCTGAATTTAAGGCCTCATTGTTCTGCGGACATGATGAAAATCTGTTTACTGGGGCTTCATTGGATTCAGAGGATAAATATGCGTCCAACAATGACTTGGATTTTGCTATGCCATATGCATGTCATGAGTTAAAAGAAGTGCATCGTTTGCGAAAGAACCTTCTTTTTGGTGATCTCACTGAAAGTTTATCTGAGGCCTATGATGATCAGAAAATGCTTCCAGTGCCTACTTCAGATCTGATGCTTCTTCCACAATCTGATTTAGATGTATCATCAGATCAGCATGATGGTAATATGATGCTTCCTTCTTTTCCAAATGTGTTGCCTTCTTTGCCACAAAATTTTAATTCCCATGACAATGATGATAATGCAGCCACTCTCTCTCAACCTCCCACTGAGATTAGTGCACGAGGGGAAGTTGATAGAAACAGAGTGATAAAATGGCGAACATCATCTTTATTATTGCTTATGCTCTTACTTCTTGGTCTTTCGTTGTACCATCTTCCAGTGGTCAAAAGGTTAGTTTTGTTGATGGTCCAAGATGGCAGATCCGAATTAAACGTCTCTCCTCCTAAGAAAAGAAGAGCCCGCAAGTCAGGAAAAAACACTGGCATTGATGACAAAAGAAATAAGCATCTATCAGCAGAAGATGAGGATGTAATAGCAACTAGCAAAATTGCTAGGGAAGCATTGCCGCATGAAGAAAAAGTTGAAGGAGCAAATGGGCGTCAAATCGGTAAACTCTTCATATCAAATAAAGAAATTGCCAAGGGAAGTAATGGTACTATAGTCCTTGAGGGAATGTATGAAGGTCGGGCGGTTGCTATCAAGCGTTTGGTCCAGGCCCATCATGATATTGCTACTAAAGAAATTCAAAATCTTATTGCATCTGACCATCATCCCAACATTGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTGCTCTGGAACGTTGTAAATGCAATTTAGATGATTTGATTCAGACTTATTCAGATTGCTGTTCAAAACCAGTTTCTGGTATAAACCAATCTTCTGAATATTTGAAGGTCCAATTAAATATGAGTAAGGATAACATGCAAGAGCTTTGGAAAGCAAATGGCCATCCGTCCTCCTTATTATTGAAGTTGATCAGGGATATGGTTTCCGGACTTGTTCATTTACACGAATTGGGAATAATACATCGTGATTTGAAACCTCAAAATATTTTGATAACTAAGGAAAGACATTTGGGTGCAAAAGTTTCTGATATGGGCATCAGCAAACGCCTTCTTGGAGATGTATCTTCCTTTAGTCATAATGGTACGGGTTGTGGCAGTTCTGGTTGGCAAGCACCAGAACAGCTTCATAAAGGAAGACAAACGCGAGCTGTAGATTTATTTAGTCTAGGTTGTATTCTGTTTTTCTGCATAACTAAGGGAAGACATCCATTTGGAGAGCGCCTAGAACGTGATTTCAATATTGTGAAAGATAAAAAGGACCTTTCTCCAGTTAAGTTCATTCCTGAGGCTGAAGATCTTATTTCTGGTTTATTAAGCCCTACTCCAAAGTTAAGGCCAAAGGCTATTGAAGTGCTGCATCATCCTTTTTTATGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGATGCTAGTGATAGGGTTGAACTAGAAGACAGGAAGACTAGTTCTAATCTTTTAATGGCATTAGAAAGTGTTGCGCCAGAGGCTTTAGGTGGTGCAAATTGGGGTGAAAAGATGGAAACTACTTTCATTGATAACATCGGCCAATTCAGGCGATATAGGTTTCACAGTGTTCGAGACTTGTTGCGAGTTACGAGAAATAAGCTGAATCATTATGGAGAATTGCCTCCCCAAATTCAGCAACTTCTAGGGCCTGTACCAGAAGGATTCAATGAGTACTTTGCTAGTCGATTTCCTAAACTCTTAATTAGTGTATATAAAATTTTCCAGAAATATTGCAAGCAAGAGGCGTGCTTCCAAAGATATTTTAAAAATGCTGATTAG 2733 0.3977 MLWLITLLWSLTGHVLRLESSQVSLVDHTDQSFNGLHPPLSRLSRSILSLSHKPNTTLVATLDGTMYLVEVGSMRVIWSFPSGSPIYRSYQAPLNKDGVKENVCGLASGFLECGDDWALYIQSEHFGKMQLSTSVADFVAATPTFSDDGGVILGSKRSTLFEVDAINGELIRSYAADNLSALWSNEMHSATNIVGTKNKELAGPAMRSTPELLLKIIRTDYSLQGVSPRSGKVLWTMNVAEFKASLFCGHDENLFTGASLDSEDKYASNNDLDFAMPYACHELKEVHRLRKNLLFGDLTESLSEAYDDQKMLPVPTSDLMLLPQSDLDVSSDQHDGNMMLPSFPNVLPSLPQNFNSHDNDDNAATLSQPPTEISARGEVDRNRVIKWRTSSLLLLMLLLLGLSLYHLPVVKRLVLLMVQDGRSELNVSPPKKRRARKSGKNTGIDDKRNKHLSAEDEDVIATSKIAREALPHEEKVEGANGRQIGKLFISNKEIAKGSNGTIVLEGMYEGRAVAIKRLVQAHHDIATKEIQNLIASDHHPNIVRWHGVEFDQDFIYLALERCKCNLDDLIQTYSDCCSKPVSGINQSSEYLKVQLNMSKDNMQELWKANGHPSSLLLKLIRDMVSGLVHLHELGIIHRDLKPQNILITKERHLGAKVSDMGISKRLLGDVSSFSHNGTGCGSSGWQAPEQLHKGRQTRAVDLFSLGCILFFCITKGRHPFGERLERDFNIVKDKKDLSPVKFIPEAEDLISGLLSPTPKLRPKAIEVLHHPFLWSSEMRLSFLRDASDRVELEDRKTSSNLLMALESVAPEALGGANWGEKMETTFIDNIGQFRRYRFHSVRDLLRVTRNKLNHYGELPPQIQQLLGPVPEGFNEYFASRFPKLLISVYKIFQKYCKQEACFQRYFKNAD 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1732 910 SUPERFAMILY Protein kinase-like (PK-like) 488 777 IPR011009 -
Alju12g1732 910 Gene3D KEN domain 776 910 IPR038357 -
Alju12g1732 910 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 777 910 - -
Alju12g1732 910 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 598 775 - -
Alju12g1732 910 Pfam Protein kinase domain 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1732 910 SMART PGNneu 839 893 - -
Alju12g1732 910 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 480 560 - -
Alju12g1732 910 ProSiteProfiles Protein kinase domain profile. 488 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1732 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Alju12g1732 910 MobiDBLite consensus disorder prediction 356 372 - -
Alju12g1732 910 Gene3D Phosphorylase Kinase; domain 1 474 560 - -
Alju12g1732 910 Gene3D Transferase(Phosphotransferase) domain 1 593 775 - -
Alju12g1732 910 Pfam Ribonuclease 2-5A 779 906 IPR010513 GO:0004540|GO:0006397
Alju12g1732 910 CDD RNase_Ire1 777 906 - -
Alju12g1732 910 ProSiteProfiles KEN domain profile. 776 908 IPR010513 GO:0004540|GO:0006397
Alju12g1732 910 MobiDBLite consensus disorder prediction 425 450 - -
Alju12g1732 910 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 49 240 IPR011047 -
Alju12g1732 910 MobiDBLite consensus disorder prediction 356 375 - -
Alju12g1732 910 Gene3D - 46 271 IPR015943 GO:0005515
Alju12g1732 910 SMART serkin_6 488 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1732 910 PANTHER IRE1-RELATED 129 909 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1732 Alju-ChrAlju12 38496273 38501437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1732 488 819 MAP Kinase Kinase Kinase AT3G13530 28.035 2.41e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Alju12g1732 Pkinase 9.7e-37 CL0016