Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1725 ATGCTTTCCCTCCAATGCAGCACCAAGAACCATCATCTTCATCATTATCAGCCACCGCCGTGCCGCCACAAGCCTGACATGAATCCACCGTCATGCATCTCCCTCTCCGCCACCGCCGTCGCCTTCATATGCATTCTGCAACTTCTCTTCCCAGCGGCGATGTCCCAACCTCACAACATGAAGACAAACCAATACGTCTTCGGCCCCTTTGACGTCACTAACTACACATCCTTGAAAGTGATTCCACCGGCGTCGATCAACTTCGGAGCGCTCCAGGTGACTCCTGACACCGCCGGCAACATCAACCTCACTGACACCGCCGGCAGAATCCTCTTCCGGCAACCATTCAAGCTCTGGGAAGACACCGGAAAAGTTGCTTCATTTAACACTTCATTCCTCATCAACGTTTATCGCGTCAACAACGCCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCTCCGAACCTCGACATTCCCCGAAACAGCCATGGCCAATACCTCGGACTCACCAACTCCACCACCGACGGCAGCCCCGAAAACCACCTCGTTGCCGTCGAGCTAGACACCGTCAAACAAGACTTCGACCCCGACGACAACCACATCGGACTTAACATCAACAGTGTCAAGTCAAAAAACAATGTCTCTCTGTCTCAATTCGGAATCCAGATCGCTCCGAACACCGCCAAATACTATGTAATCTGGATAGATTACAACGGTTCAAGCAAGAAAATCAACATTTTCATCAGAGAACAACCAGACAGAACTGGACCAATAGTATCAAAACCTGAAAAACCGGTGTTAACTTCAGATCTAGATCTCAAAACCATCGTGAAACAGAACTCTTACTTGGGATTCTCTGCTTCCACAGGAACAACCTACCAATTAAACTGTGTTCTGAAATGGAACATGACAGTGGAGATTCTTTCAGAAAACAAGACAAAGTTGCGATCTTTGAAGATGGGTTTGGGTATTGGGGTGCCGTTGATGAGTTTGATTCTTGTTGGGATTGGTGGGTTAGTGTGTTATGTTTATAAGAAGAGAAGGAGGAGGAGGTTGGACGATGAACAGATTCTGGGGACGTTGAAGAGCTTGCCGGGAACGCCGAGAGAGTATTCGTTTAAGGAATTGAAGAAGGCGACGAACAATTTCAGTGAGAAGAACAAGCTTGGAGAAGGAGGGTATGGGATGGTGTACAGAGGGATTTTGCAGAAAGAGAATAATCTGCAAGTTGCTGTTAAGAAATTTTGCAGAGATGCTATGAAATGCAAAGATGATTTCTTGGCTGAACTCTCCATTATCAATCGTCTTCGTCATAAACATCTTGTTCGCTTACTAGGTTGGTGCCACAAGAATGGAATGTTAGTATTGGTATATGAGTTCATGCCCAATGGCAGCTTAGACAACCACCTTTTCTTTGAGGAAGGGAAACCAACACCACCTCTAAGTTGGAACCTACGTTACAAGATCATCTCCGGTGTAGCCTCAGCACTTAACTATCTTCACAATGAGTATGACCAAAAAGTAGTCCACAGAGATCTCAAAGCAAGCAATATCATGCTAGACTCAGACTTCAACGCCCGCCTGGGCGACTTTGGCCTGGCTCGAGCCATTGAGCATGAGAAAACATCATATGCTGAGGTCGAAGGAATCCATGGCACAATAGGGTACATTGCGCCCGAGTGCTTCCACACGGGGAAGGCAACCCGACAATCAGATGTGTTCAGCTTTGGGGCAGTTCTTCTAGAAGTGGTGTGTGGCGAGAGGCCGTGGACAAAGAGGGCAGGGTTTCAGTTGTTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGTAGGATTCTTGAGGCAGTGGATAAGAGGCTAGGGAATGAGTATGATGTTGAAGAAGCAGAGGGAATATTGAAATTAGGGTTAGCTTGTTCTCATCCAATTGCTGCTGAGAGGCCAAAGATGCAAAGTATAGTTCAGATCATAAGTGGGGCAGTTCTTGTGCCTTATGTGCCTCCAACCAAGCCTGCTTTTGTTTGGCCTACTGTTGATTTTGGAAGCTTCATTAGTGATCTCACAACTCCATCTTCTACCACTGGAAACACGCCTGTTCATAGAGATTCTGATCCTCTACATTCATCAAAGTGA 2133 0.4702 MLSLQCSTKNHHLHHYQPPPCRHKPDMNPPSCISLSATAVAFICILQLLFPAAMSQPHNMKTNQYVFGPFDVTNYTSLKVIPPASINFGALQVTPDTAGNINLTDTAGRILFRQPFKLWEDTGKVASFNTSFLINVYRVNNATPGEGVAFVIAPNLDIPRNSHGQYLGLTNSTTDGSPENHLVAVELDTVKQDFDPDDNHIGLNINSVKSKNNVSLSQFGIQIAPNTAKYYVIWIDYNGSSKKINIFIREQPDRTGPIVSKPEKPVLTSDLDLKTIVKQNSYLGFSASTGTTYQLNCVLKWNMTVEILSENKTKLRSLKMGLGIGVPLMSLILVGIGGLVCYVYKKRRRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFSEKNKLGEGGYGMVYRGILQKENNLQVAVKKFCRDAMKCKDDFLAELSIINRLRHKHLVRLLGWCHKNGMLVLVYEFMPNGSLDNHLFFEEGKPTPPLSWNLRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTIGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTKRAGFQLLVDWVWYLYGEGRILEAVDKRLGNEYDVEEAEGILKLGLACSHPIAAERPKMQSIVQIISGAVLVPYVPPTKPAFVWPTVDFGSFISDLTTPSSTTGNTPVHRDSDPLHSSK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1725 710 FunFam probable L-type lectin-domain containing receptor kinase S.5 461 662 - -
Alju12g1725 710 ProSiteProfiles Protein kinase domain profile. 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1725 710 SMART serkin_6 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1725 710 ProSitePatterns Legume lectins beta-chain signature. 183 189 IPR019825 -
Alju12g1725 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Alju12g1725 710 CDD STKc_IRAK 389 657 - -
Alju12g1725 710 Gene3D Transferase(Phosphotransferase) domain 1 461 662 - -
Alju12g1725 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 307 IPR013320 -
Alju12g1725 710 Pfam Legume lectin domain 64 311 IPR001220 GO:0030246
Alju12g1725 710 Gene3D - 63 322 - -
Alju12g1725 710 Gene3D Phosphorylase Kinase; domain 1 368 460 - -
Alju12g1725 710 PANTHER - 95 661 - -
Alju12g1725 710 Pfam Protein tyrosine and serine/threonine kinase 386 655 IPR001245 GO:0004672|GO:0006468
Alju12g1725 710 SUPERFAMILY Protein kinase-like (PK-like) 365 685 IPR011009 -
Alju12g1725 710 CDD lectin_legume_LecRK_Arcelin_ConA 64 305 IPR001220 GO:0030246
Alju12g1725 710 ProSitePatterns Protein kinases ATP-binding region signature. 389 414 IPR017441 GO:0005524
Alju12g1725 710 FunFam probable L-type lectin-domain containing receptor kinase S.5 368 460 - -
Alju12g1725 710 MobiDBLite consensus disorder prediction 690 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1725 Alju-ChrAlju12 38417952 38422215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1725 53 673 Receptor kinase-like Gene Family AT5G55830 37.668 2.20e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju12g1725 PK_Tyr_Ser-Thr 2.1e-49 CL0016