Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1724 ATGACCATTGATATGCCATCGCCCATGGCCCAGAGTATGAGGACAAACAGACCTTCCTTTAGTTCTAGTAATGGCTACGATGATACCCCTCTTCACAATCATGCTGGAGTTAGCAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCACCACCCACACCTTCAACTCTAACAATGGCTATTCCAGCTGAACTAGCTGGAGCTGTGCCCTTGATGGATAGATTCCAGGTGGAGGGGTTTCTAAGATTAATGCAGAAACAAATTAATTCTGCTGGGAAACGTGGATTTTTTTCTAAGAGATCTGTAGGCTTGCAAACTCGAGAGAAGTTTACATTTGAGGACATGTTGTGTTTCCAAAAGGATCCTATACCAACATCATTGCTCAAGATTAATGGTGACATGGTAAGCCGGGCAACCAAACTATTTCAGATCATTTTGAAGTACATGGGAGTAGATTCACCAGAGCGAGTGAATCCAATAAGTCTAGATGAAAGGGTTGAACTTGTAAGTAAACTATACAAGCACAGTTTGAAGCGTTCAGAACTCCGAGACGAACTTTTTGTTCAATTATCAAAACAAACCAGAAATAACCCTGAAAGGCAATGGTTGATTAAAGCATGGGAGCTGATGTATTTGTGTGCATCCTCCATGCCACCTAGTAAAGACATTGGAGGATATTTGTCTGAATATGTTCATAATGTGGCTCACAATGTGACAACTGATGGTGAAATCCAAGCCCTTGCTCTAAATACATTAAATGCTCTCAAGCGTTCTGTCAAAGCTGGTCCTAGACATATTATGCCTGGACGTGAGGAGATTGAAGCTTTGATGACTGGGAGAAAGCTTACAACTATAGTGTTTTTCTTGGATGAAACTTTTGAAGAAATCACATATGACATGGCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCGGGGATCATCAAATTGTCAACGTACAATAGCTTTAGTCTGTTTGAATGCCATAAACTTGTTACTGGGTCCAAATCACCGGATTCTGGAAATGAAGAGTACATTGGGTTGGATGACAACAAATATATTGGAGACCTCTTGGCAGAATTCAAGGTAGCAAAAGATCGAAGTAAGGGAGAAATCTTGCAATGTAAACTTATATTTAAGAAAAGGCTATTTCGAGAATCAGATGAAGCTGTGGCAGATCCTATGTTTGTACAATTATGCTATGTACAATTACAACATGATTATATCTTGGGGAATTATCCTGTTGGAAGAGATGATGCTGCCCAACTGTCTTCATTGCAAATCCTGGCTGAAATTGGATTTGTTAGAGCACCTGAGTCTTGCACAGATTGGGATTCACTTCTGGAGAGATTTCTACCTAGACAGATTGCAATTACTCGAGCTAAACGGGAATGGGAGCTGGACATTCTTTCTCGCTATCATTCATTGGAACATCTGACAAAAGATGAGGCAAGGCAACAGTTCCTTCGCATATTGAGAGCACTTCCTTATGGAAATTCGGTTTTCTTTCATGTTCGCAAAATTGATGATCCCATTGGACTTCTACCCGGAAAAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTTTTCCGTCCTGTTCCAAAGGAATACCTTCACTCAGCTGAGTTAAGAGACATAATGCAATTTGGAAGTAGCAATACTGCAGTATTTTTCAAAATGCGAGTCGCAAGTGTTCTACACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTCGCTCTTCAGACACATATCAATGATGTAATGTTGCGCCGATATTCCAAGGCACGGTCTGCTGGTGGTGGTTCTGTAAATGGAGATATTGGAAACAATCTAAAGAGTCCTACTTTAGAAATATATGAAAGGCGTGTTCAAGATCTGTCAAAAGATGTTGAAGATTCTCAAAGAAATGTTGATAAATTGGTGGAAGAATTGCGGGAAAAACAACAGCAAGAAGAGAAAATGAAGGAAGAATTGGAGGCATTGAAGGAATCCTTAAATGCTGATAAACAAAGTCTTGAGGAAGTAACTTGTGAATGTGATAGGCTTAGATCAATATGCAATGAAAAGGATAAGGCTATTCAGGCTGCAACTGTAGAGAAAAGGAATATGGAAGTAAGATTGACCAAGTTGAATAATCTGGTACTAGAAAACACAAAAAAGGAGTCTGTTGAAGCAAATAACCAGGATTTGCATAAGCTTGAAAATGAGCTAAAAGTTAGTAAAGATGAGCTGCTTGCGTCAGAAGAAACTATCACAAGCTTGACGAATGAAAAATTAATTTTGGCACGGAAGCTATCAGAGCTGGAGAAGAGGAATGCTGATGAGAATAGTGTTCTTGAACGAAGATTTGAGCAAGAACGCAAGGCCTTGAAATCTCGAGTGAATGACCTTGAAAAAAAGCTAGAAGGATTTAGACAAGAATTAGCTGCTACTGAATCCACTTTATCAATCAAGGATGCTGAGTTGGTTGCATTGCGGAATAATTTAAGGGAACTGGAAGAGCTAAGAGAAATGAAAGAGGACATTGATAGGAAGAATGAACAAACAGCTGCCATATTAAGGATGCAAGGAGCTCAATTAGCAGAAATGGAAGCTCTTTATAAAGAAGAGCAAGTTCTGCGGAAACGCTATTTCAATACAATAGAAGACATGAAAGGCAAGATAAGAGTTTATTGCCGTCGAAGGCCTCTTAATGGTAAAGAGATCAATGATGAAGAGAGAGATGTGCTGACCAGCATAGATGAGTTTACTATTGAACATCCATGGAAGGACGATAAACCAAAGCAATTTGTGTATGATCGTGTATTTGATGATGATGCTACCCAAGAAGATGTATTTGAGGATACAAGGTATTTGGTACAGTCTGCTGTAGATGGCTATAATGTCTGCATATTTGCGTATGGTCAAACCGGGTCTGGGAAGACATATACAATCTATGGAACTGAAAACAGCCCTGGACTCACCCCACGCGCTACTGCAGAATTGTTCAAAATTTTAAGGAGAGAGAGTAACAAATACTCTTTTTCTTTAAAGGCATACATGGTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGCGAAGCGTTTAAAATTAGATATCAAGAAGGATTCAAAGGGCATGGTGGTTGTAGAAAATGTGACAGTGTTGCCAATTTCCACCATGGAGGAATTGAATGACATAATAGAGAGAGGATCTGAACGACGGCATACATCGGGAACTCAGATGAACGAAGAAAGTTCGAGATCTCATCTTATATTGTCAGTTGTAATTGAAAGTACCAACCTCCAAACCCAATCAATGGCAAGAGGAAAGTTAAGTTTTGTAGATCTTGCTGGGTCAGAAAGAATAAAAAAATCTGGTTCCACTGGTAATCAACTTAAGGAAGCTCAGAGTATAAATAAATCATTATCAGCTCTTGGGGATGTCATCAGTGCTTTATCTTCTGGTGGCCAACACACTCCTTACCGGAATCACAAGTTGACAATGCTAATGAGTGATTCACTTGGCGGTAATGCTAAAACACTCATGTTCGTGAATGTATCCCCGGCAGAATCAAACCTGGAGGAGACACACAATTCTCTTATGTATGCGTCACGAGTGAGGTCGATCGTGAATGATCCGAGCAAGAATGTTTCATCGAAAGAGGTGGCTCGGTTGAAGAAGTTGGTGGCATACTGGAAGGAGCAGGCAGGCCGAAGGGGTGAAGAAGAATTGGAAGAAATTCAAGAGGAACGGCCGACGAAAGAGCGGTCAGATGGCCGGCATTCTTTGTAG 3804 0.4014 MTIDMPSPMAQSMRTNRPSFSSSNGYDDTPLHNHAGVSNGDDYDSDSSNFAPPTPSTLTMAIPAELAGAVPLMDRFQVEGFLRLMQKQINSAGKRGFFSKRSVGLQTREKFTFEDMLCFQKDPIPTSLLKINGDMVSRATKLFQIILKYMGVDSPERVNPISLDERVELVSKLYKHSLKRSELRDELFVQLSKQTRNNPERQWLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHNVTTDGEIQALALNTLNALKRSVKAGPRHIMPGREEIEALMTGRKLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSTYNSFSLFECHKLVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKVAKDRSKGEILQCKLIFKKRLFRESDEAVADPMFVQLCYVQLQHDYILGNYPVGRDDAAQLSSLQILAEIGFVRAPESCTDWDSLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGKIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVASVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAGGGSVNGDIGNNLKSPTLEIYERRVQDLSKDVEDSQRNVDKLVEELREKQQQEEKMKEELEALKESLNADKQSLEEVTCECDRLRSICNEKDKAIQAATVEKRNMEVRLTKLNNLVLENTKKESVEANNQDLHKLENELKVSKDELLASEETITSLTNEKLILARKLSELEKRNADENSVLERRFEQERKALKSRVNDLEKKLEGFRQELAATESTLSIKDAELVALRNNLRELEELREMKEDIDRKNEQTAAILRMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRRRPLNGKEINDEERDVLTSIDEFTIEHPWKDDKPKQFVYDRVFDDDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTYTIYGTENSPGLTPRATAELFKILRRESNKYSFSLKAYMVELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVVVENVTVLPISTMEELNDIIERGSERRHTSGTQMNEESSRSHLILSVVIESTNLQTQSMARGKLSFVDLAGSERIKKSGSTGNQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETHNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGEEELEEIQEERPTKERSDGRHSL 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1724 1267 Gene3D MyTH4 domain 99 279 IPR038185 -
Alju12g1724 1267 CDD FERM_C_KCBP 500 606 - -
Alju12g1724 1267 Gene3D - 501 608 IPR011993 -
Alju12g1724 1267 MobiDBLite consensus disorder prediction 1 29 - -
Alju12g1724 1267 MobiDBLite consensus disorder prediction 1240 1267 - -
Alju12g1724 1267 PANTHER MYOSIN VII, XV 4 898 - -
Alju12g1724 1267 SUPERFAMILY Prismane protein-like 835 896 IPR011254 GO:0003824|GO:0016491
Alju12g1724 1267 CDD KISc_C_terminal 890 1215 - -
Alju12g1724 1267 Coils Coil 621 683 - -
Alju12g1724 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Alju12g1724 1267 PRINTS Kinesin heavy chain signature 1083 1100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 PRINTS Kinesin heavy chain signature 964 985 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 PRINTS Kinesin heavy chain signature 1163 1184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 PRINTS Kinesin heavy chain signature 1114 1132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 FunFam Kinesin-like calmodulin-binding protein 836 1215 - -
Alju12g1724 1267 Pfam Kinesin motor domain 898 1213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Alju12g1724 1267 Pfam FERM central domain 389 503 IPR019748 -
Alju12g1724 1267 Gene3D - 282 386 - -
Alju12g1724 1267 ProSitePatterns Kinesin motor domain signature. 1113 1124 IPR019821 GO:0003777|GO:0005524|GO:0007018
Alju12g1724 1267 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Alju12g1724 1267 Coils Coil 785 857 - -
Alju12g1724 1267 ProSiteProfiles Kinesin motor domain profile. 892 1213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 FunFam Kinesin-like calmodulin binding protein 386 497 - -
Alju12g1724 1267 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Alju12g1724 1267 Gene3D Kinesin motor domain 879 1215 IPR036961 -
Alju12g1724 1267 MobiDBLite consensus disorder prediction 1 56 - -
Alju12g1724 1267 Coils Coil 728 776 - -
Alju12g1724 1267 Gene3D - 1216 1263 - -
Alju12g1724 1267 SMART kinesin_4 890 1221 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju12g1724 1267 Coils Coil 698 718 - -
Alju12g1724 1267 SMART B41_5 279 503 IPR019749 -
Alju12g1724 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 501 610 - -
Alju12g1724 1267 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Alju12g1724 1267 MobiDBLite consensus disorder prediction 40 56 - -
Alju12g1724 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 892 1240 IPR027417 -
Alju12g1724 1267 SUPERFAMILY PH domain-like 503 591 - -
Alju12g1724 1267 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Alju12g1724 1267 CDD FERM_B-lobe 398 496 IPR019748 -
Alju12g1724 1267 Gene3D - 395 496 IPR014352 -
Alju12g1724 1267 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1724 Alju-ChrAlju12 38408821 38416382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1724 39 1262 Calmodulin-binding Proteins AT5G65930 73.846 0.0 1852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1165 09 34831318 34843228 Alju12g1724 12 38408821 38416382 CCT