Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1702 ATGGAAATCGTTCGATCTCACGTCCATCGGAATATCTCCACTAACGATGCCGTCGATACCCTTCCACTCTATCGTTCTGCCCCACCCCTCGAAGTCAGGCTCGAGGATTTCGAGCTATACGCCATGGATCGTCTTCGAGTTCTCAAGGGGATTTCTGATGGTTTATCTCGTGGGAAGAAACCAGAAGAAATGGATCAATTAGTTAAAAATCTATGGAAAACGCATATGAGGCATCAACAGGCATCTGAAGTTCTAAATAAGGATATTATATCTCATTTTGTTCTACGGCTTGTATATTGCCGAACTGAGGACTTGAGGAAATGGTTCCTATCTATGGAAACTTCACTATTTCGCTACCGATTTCGCCGAGAAAATGCTGAAGCTCAGAGGGCAATCATGGCAGAAGTTGACCTTCCTTACAAGGCTGTTAGCCTTGTGGAATTTGAGAGTGTGAAGGACAAACTGGAACAAGTTGCCCGGTCCATTGGCCAGCCTCTACGTGACAATGACACTATATTTTTCAAGGTACCATTTGAAGAAGTTCAAGAGCTTGTGGCTGGTCGGAAAGTATTTATAAGTCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGGATATTGTTATCTCATTGCTAGCCACACTATTCCGCAGTCAGCTATCCAAGGCACTCGTACTCACAAACAGATTGTGGAAGCCCTGTGCTCAAGTTATCTAGGTCCTGACTATTCTCAGCCAAGGGAGTATTCTCAGATATCATTAAAGGATATTGATCAAGTTGCTAAGAGCTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTTAAGGGAGTTGGTCTGAATCTGGATGATGCTCTTGCATTTTGGAGACATGAATTCTCTCAAAAGGTTGGTCTGGAGAGGTTTGAGAAAGAGAGTTGGAGATCATCATGGATGCCCCTATCGACACTTCAGGTCACATTTATTACTAATGTCAGAATTCATGAGGATAGTTTAGCTTTCAGTACAAAAAAGGATAGTTTAGCTCTGCCAACCAAGTTCATTACATGGGCTTTGTTTGTTTCATCTGATGTTAGCGGTGTGAAGTTGAAGCCTAGTATAAAGATTGGTTCTATCCAGCTTGAGAATCTTCGAGCAGCTCTTAATAGAATGGGGGTGAATGGTCGAGCAATTGAAGACGTAATGGACAAAGTACGAAATAGACATTATCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCAAGCAATGTGATGCAGGGATTAATCATCCAAATCAATACTTCAGTGACAGCCAAAAAATATTGAAGCCTAAGGGGAAGTTGGGAAAGAGTGCTCGCAGAGTATTGGGCATAAGAAAGCGCGCAAGATCCTCCGAACGCATCCTAATTTTCAAGATCTACGACTTCCCTGACTTGAGGCGTCGATGA 1488 0.4267 MEIVRSHVHRNISTNDAVDTLPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDGLSRGKKPEEMDQLVKNLWKTHMRHQQASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMETSLFRYRFRRENAEAQRAIMAEVDLPYKAVSLVEFESVKDKLEQVARSIGQPLRDNDTIFFKVPFEEVQELVAGRKVFISQGYAYVGMNQVGYCYLIASHTIPQSAIQGTRTHKQIVEALCSSYLGPDYSQPREYSQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRHEFSQKVGLERFEKESWRSSWMPLSTLQVTFITNVRIHEDSLAFSTKKDSLALPTKFITWALFVSSDVSGVKLKPSIKIGSIQLENLRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKGKLGKSARRVLGIRKRARSSERILIFKIYDFPDLRRR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1702 495 CDD PriL_PriS_Eukaryotic 23 451 IPR016558 -
Alju12g1702 495 FunFam DNA primase large subunit 5 213 - -
Alju12g1702 495 Pfam Eukaryotic and archaeal DNA primase, large subunit 173 323 IPR007238 GO:0006269
Alju12g1702 495 Pfam Eukaryotic and archaeal DNA primase, large subunit 393 448 IPR007238 GO:0006269
Alju12g1702 495 PANTHER DNA PRIMASE LARGE SUBUNIT 392 458 IPR007238 GO:0006269
Alju12g1702 495 Gene3D - 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1702 Alju-ChrAlju12 38157843 38165762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1702 1 458 Core DNA Replication Machinery Family AT1G67320 52.259 9.67e-169 483