Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1686 ATGAAATGGGAATGGCCATGGCTTCTTTATGTTCTGCTGATATGTCATGTAATCAATAGGAATGAAGCAATCAGTCCTGATGGAGAGGCACTTCTTAACTTCAGAACAGCAGTTAGCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTAAAATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTGGATCATCTCAAATTAAGTGGGTCTATTTCAGCTGACCTTGGGAAGCTAGAGCACCTGAGGATTCTTGCTCTTAACAACAACAACTTATATGGGACTATTCCATCAGAACTAGGAAATTGCACTGAATTGCAAGAAATATATTTGCACAGTAACTACCTTAGTGGAGTGATCCCAAGTGAAATCGGAAATCTTTCACAACTTCAAAATTTGGATATATCAAGTAACTCCCTCAGTGGGAGTATTCCCCCATCACTTGGGAAATTATATAGCCTAAAAAATTTCAACGCCTCGTTCAATTTTCTGGCTGGACCAATACCTCTGGACGGTGTCCTTGCCAACTTCACTGAAAGCTCCTTTCTCGGAAATCTTGGTTTGTGTGGAGTGCAAATCAATTCAACATGTAAGAATGATGGTTCGCCTAAATCCAGTTCTCAATCTTCAATTTCAGACCAAAATGGAAAGAGGAAAGATTCTGGCCGGCTGCTTATTAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACCGAGAAAGTCTAGCAATGGATGTTTGTGGAGGGGCATCCATTGTTATGTTTCATGGAGATCTACCATATTCTTCAAAAGATATTATTAAAAAACTTGAGACTTTAAATGAGGAACACGTAATTGGTTGTGGAGGATTTGGAACAGTTTACAGGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAATGATGGCTTTGATCGATTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATAAAACACAGATATCTTGTGAACTTAAGAGGATATTGCAATTCACCTTCATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTTGATTGGGATTCACGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCGCTGACTTTGGACTTGCCAAACTTCTGGAGGATGAGGAATCTCACATCACTACCATTGTTGCAGGAACATTTGGTTATCTAGCTCCAGAATATATGCAAAGTGGTAGAGCAACTGAAAAGACTGATGTTTATAGTTTTGGTGTTTTGGTACTTGAAGTGTTGAGTGGAAAGCGGCCAACAGACGCATCATTCATTGAGAAGGGCCTCAATATTGTTGGTTGGTTAAATCATTTAATTACGGAAAACAGAGCCAGAGATTTAGTTGACCAGCAGTGTGAAGGAGTACGGGTAGAGAGTCTGGATGCGCTGCTCTCTGTAGCTATACAGTGCGTATCCTCGAGTCCGGAGGATCGACCCACAATGCACAGAGTGGTCCAATTGATGGAATCAGAGGTGATGACCCCTTGCCCGAGTGACTTTTATGACTCCAACTCCGAATAG 1764 0.4116 MKWEWPWLLYVLLICHVINRNEAISPDGEALLNFRTAVSPNSDLLPWRPEDPDPCKWKGVKCDPKTKRVTNLFLDHLKLSGSISADLGKLEHLRILALNNNNLYGTIPSELGNCTELQEIYLHSNYLSGVIPSEIGNLSQLQNLDISSNSLSGSIPPSLGKLYSLKNFNASFNFLAGPIPLDGVLANFTESSFLGNLGLCGVQINSTCKNDGSPKSSSQSSISDQNGKRKDSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHVIGCGGFGTVYRLAMDDGNVFALKRIVKLNDGFDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVADFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITENRARDLVDQQCEGVRVESLDALLSVAIQCVSSSPEDRPTMHRVVQLMESEVMTPCPSDFYDSNSE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1686 587 ProSiteProfiles Protein kinase domain profile. 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1686 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Alju12g1686 587 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 570 - -
Alju12g1686 587 SUPERFAMILY Protein kinase-like (PK-like) 287 569 IPR011009 -
Alju12g1686 587 Gene3D Ribonuclease Inhibitor 25 209 IPR032675 -
Alju12g1686 587 MobiDBLite consensus disorder prediction 209 226 - -
Alju12g1686 587 ProSitePatterns Protein kinases ATP-binding region signature. 308 334 IPR017441 GO:0005524
Alju12g1686 587 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 276 377 - -
Alju12g1686 587 SMART serkin_6 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1686 587 Gene3D Transferase(Phosphotransferase) domain 1 378 576 - -
Alju12g1686 587 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1686 587 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Alju12g1686 587 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Alju12g1686 587 MobiDBLite consensus disorder prediction 209 230 - -
Alju12g1686 587 SUPERFAMILY L domain-like 37 191 - -
Alju12g1686 587 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 185 - -
Alju12g1686 587 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Alju12g1686 587 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 378 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1686 Alju-ChrAlju12 38040819 38046796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1686 1 578 Receptor kinase-like Gene Family AT2G35620 73.748 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Alju12g1686 Pkinase 3.5e-46 CL0016