Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1683 ATGTTTGGAGGCGGAGAAGACGAGGCCCTGGCCCGATTGGGCATCATGACGCCGTCCCTCCTCAAACCGGCCACGTCGTCAGTGATTTCCGGTGAGATGTCACCGTCGACAGCAGCTGCGCCTGTGAGGGACGACAGGGTTCCCGCGCAGCCGCAGTGGAGCCAGCAGGAGACGAGGGAGTTTATAGCGATCCGCGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTTGTTAGTGCCAAGATGAGGGAGCGAGGCTTCAGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAGGAGACATCAGATCCAGAGCATGGGAGACAGTGTCCCTTTTTTGAAGAATTACATGCCATCTTTGCTCAAAGAGCACAGAACATGCAGCGGTTACTTCTTGAATCTGAAGGCCGATCAACTCAGACAAAGAAGGGGATGAAAAGGGTTAGTGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGTTGAAGATGACAGTGAAGAGGAAAAACCTGTAAGAAGCAACCCTCGCAAAAGGAAAGCAGACAAGGTTGCTATGGAGAAGTCTTCAAGGGCAAGCAATGCATCGGATGCGATCAGTAATACTGCCAATAGCATTCAGGAAATGCTTAAGGAATTTTTCCAACAGCAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCGGGCATGGAGGGAGAGAGAAGAGCAGAGAAGAATGAGAGAAGAGAGCCGAGCAGAAAGGAGAGATGTACTAATGACGACTCTTTTGAACAAGCTCATCCATGAATCTAATTAG 939 0.5016 MFGGGEDEALARLGIMTPSLLKPATSSVISGEMSPSTAAAPVRDDRVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAQNMQRLLLESEGRSTQTKKGMKRVSGDRSSEEFSEDDDEVEDDSEEEKPVRSNPRKRKADKVAMEKSSRASNASDAISNTANSIQEMLKEFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIERAWREREEQRRMREESRAERRDVLMTTLLNKLIHESN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1683 312 MobiDBLite consensus disorder prediction 26 55 - -
Alju12g1683 312 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Alju12g1683 312 MobiDBLite consensus disorder prediction 186 205 - -
Alju12g1683 312 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Alju12g1683 312 Gene3D - 53 114 - -
Alju12g1683 312 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Alju12g1683 312 MobiDBLite consensus disorder prediction 149 217 - -
Alju12g1683 312 MobiDBLite consensus disorder prediction 155 170 - -
Alju12g1683 312 SMART sant 49 111 IPR001005 -
Alju12g1683 312 PANTHER FI21293P1 45 309 - -
Alju12g1683 312 Coils Coil 257 277 - -
Alju12g1683 312 CDD GT1 51 116 - -
Alju12g1683 312 MobiDBLite consensus disorder prediction 171 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1683 Alju-ChrAlju12 38027795 38029320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1683 34 312 Trihelix Transcription Factor Family AT2G38250 45.357 7.55e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju12g1683 Myb_DNA-bind_4 9.1e-23 CL0123