Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1668 ATGATGGAGAAGAAGAGTGAGAATGAGAATTCATCAGGTGGTCGAGAGTTCTATGCAAATGGAAATCGAATGAATACTGCAGAAGTTGAAGCCAAACTTGACCAAGGAAATGTTGAAGCCGCTGAATCTGCATTGAAAGACGGCTTATCTATCACTTCTGAGGAAGCAAGAGTTCTTATCGGAAAGCTAGAGTATCAAAGAGGAAATTATGCAAGTGCTCTTCGTGTGTTTGATGGAGTTGATCTCCAAGCTGCCCTTCAGCAATTACAATCATTAGTTTCTGACAAATCGTCAGCCAAGAAAGCACGCCCTCGCGCTGAATCACCTACCTCAATCCCTAGGCATGCTGCTAATTTGATGCTTGAATCCATCTACTTCAAAGCAAAAACTCTACGAAAGCAGGGGAAAATATCTGAAGCTACCACTGAATGCAAAACTGTGCATGAGGGTATTGAGAAGGCCTTCAGTCAGGGTGTATCGGATATTCAATTGGACAACACCTTGCAAGAAGTAGTCAGTGACATTGTAGGACTTCTTCCAGAGCTTAAAAAGCAAGCAGGTAACTATCAAGAGGCATTGTCTGCTTATAGGCGTGCTCTTCAACTTCTGAGTCAATGGAACTTTGATACTGATGGCTGTGCTAGAGTTCAGAAAGGACTTGCTATGCTGTTGCTGTACGGTGGGTTCGAGGCTAGCCCACCCAAGGCGACTGATCAGCACGAGGGGTTTTATGTACCTAAAAACAATCTGGAAGAGGCAATTCTTCTTCTAATGCTTGCTGTGAGGAGACTTTGCATTGATAAGTCCAAGTGGGATCCTTCGGTGATGGAGCACCTGACTTTTGCACTTTCTGCATGTGGCCAAACTTCTGTTCTAGCAAAGCAACTTGAAGAGTTAATGCCTGGATTATATCATCGTATTGATCGTTGGAATCTTCTAGCTTTATGTCTCTATGGAGCAGGACAAAACGAAAGTGCTTTGGATCTACTTAGGAAGTCTTTGCACAAACATGAGAGACCAAATGACATCAAATCATTGTTAGTAGCTGCCAGGATCTGCAGTGAGAAACCTTGTCTTGCTGCTGAGGGAGTGGGGTATGCTCAAAGTGCAATCAATAATGCTAAGGGCATAAACGAGCATTTGAAAGGTGTGGGTCTTAGAATGCTGGGACTTTGTCTTGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTTCAAAGGTCTAATCTTCAGTCTAAAGCTCTGAAATCATTAGAAGGGGCGATGGGATTTGAGCATAACAATTCTGATCTGATTTTTGAGCTGGGTGTTCACTATGCAGAACACAGAAATTTGACGACTGCTTTTCGCTATGCAAAGCAGTTCTTTGATGAAACAGGAGGATCTATATTGAAAGGTTGGAGATTGATTGCTCTGATTTTGTCTGCTCAACAACGATTCACGGAGGCTGAAGTGGTGATAAATGCTGCTTTAGATGAGACTGCAAGATGGGAGCAAGGGCCACTGCTTAGACTGAAAGCAAAGCTCAAGATTTTCCAATCACAACCCATGGAGGCTGTTGAAACTTATAGATACCTCCTTGCATTAATTCAAGCTCAAAAGAATTCCTTTGGGCCTATGAAAATAAATACACAGGTTCAAGATGATGTGAAGGAAATTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTTAAGGAGTACTCAGCAGAAACAGTGCACATCGAAGGCAAGAACGAAACCTTAAGTCTTTTGTGCGAAGGACGTAGACAAAAACAAGAAGCTATTTCTGCTATCACGAAAGGGCTCCTGTTTGAACCACGCTATGTTCCAAGCAAGATCCAGATGGGTGTTTTACTACTGAAATTGAATTCAAAGTCAAAATCTTTGCCTTTAGCTAGAAGCTTGCTTTCTGATGCACTTCGATTTGAACCCACTAACCGCATGGCTTGGTTTCACTTGGGAAAAGTTCACAAGTATGATGGCCGAATAGGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGACCCTGTTGAGAGTTTCAGCACTTTGCTTTGA 2121 0.4281 MMEKKSENENSSGGREFYANGNRMNTAEVEAKLDQGNVEAAESALKDGLSITSEEARVLIGKLEYQRGNYASALRVFDGVDLQAALQQLQSLVSDKSSAKKARPRAESPTSIPRHAANLMLESIYFKAKTLRKQGKISEATTECKTVHEGIEKAFSQGVSDIQLDNTLQEVVSDIVGLLPELKKQAGNYQEALSAYRRALQLLSQWNFDTDGCARVQKGLAMLLLYGGFEASPPKATDQHEGFYVPKNNLEEAILLLMLAVRRLCIDKSKWDPSVMEHLTFALSACGQTSVLAKQLEELMPGLYHRIDRWNLLALCLYGAGQNESALDLLRKSLHKHERPNDIKSLLVAARICSEKPCLAAEGVGYAQSAINNAKGINEHLKGVGLRMLGLCLGKQAKVASSDFQRSNLQSKALKSLEGAMGFEHNNSDLIFELGVHYAEHRNLTTAFRYAKQFFDETGGSILKGWRLIALILSAQQRFTEAEVVINAALDETARWEQGPLLRLKAKLKIFQSQPMEAVETYRYLLALIQAQKNSFGPMKINTQVQDDVKEIDVWHGLANLYASLSHWKDAEVCLQKAREFKEYSAETVHIEGKNETLSLLCEGRRQKQEAISAITKGLLFEPRYVPSKIQMGVLLLKLNSKSKSLPLARSLLSDALRFEPTNRMAWFHLGKVHKYDGRIGDAADCFQAASMLEESDPVESFSTLL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1668 706 SUPERFAMILY TPR-like 499 644 IPR011990 GO:0005515
Alju12g1668 706 Gene3D Tetratricopeptide repeat domain 456 590 IPR011990 GO:0005515
Alju12g1668 706 Pfam Tetratricopeptide repeat 28 78 - -
Alju12g1668 706 SUPERFAMILY TPR-like 411 495 IPR011990 GO:0005515
Alju12g1668 706 Gene3D Tetratricopeptide repeat domain 243 455 IPR011990 GO:0005515
Alju12g1668 706 Gene3D Tetratricopeptide repeat domain 24 225 IPR011990 GO:0005515
Alju12g1668 706 SUPERFAMILY TPR-like 185 694 IPR011990 GO:0005515
Alju12g1668 706 PANTHER PROTEIN NPG1 4 703 IPR043376 -
Alju12g1668 706 MobiDBLite consensus disorder prediction 1 23 - -
Alju12g1668 706 Gene3D Tetratricopeptide repeat domain 595 702 IPR011990 GO:0005515
Alju12g1668 706 SMART tpr_5 307 340 IPR019734 GO:0005515
Alju12g1668 706 SMART tpr_5 552 585 IPR019734 GO:0005515
Alju12g1668 706 SMART tpr_5 664 697 IPR019734 GO:0005515
Alju12g1668 706 SMART tpr_5 173 206 IPR019734 GO:0005515
Alju12g1668 706 SMART tpr_5 463 496 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1668 Alju-ChrAlju12 37905006 37909022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1668 15 706 Calmodulin-binding Proteins AT2G43040 64.173 0.0 890