Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1657 ATGTGGACGGCGGTCCAACCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTCAAGTACCTCAAGGCTGGACTGGCCGTTCCGCTCGACCTCCTCATCCCCATTCGCAAGAGCCTTGAATTGATGCCGCCGAAGCTCGTTCATCACCCGTCTTTGGGTTATTGCTCTTATTACGGGAAGAAGATCGACCCAGAGCCGGGGAGGTGTCGAAGGACGGATGGGAAAAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCCAAATACTGTGAACGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCTCAGTCTTCGTCCAATTTGGCATCGGACGTTGCTGCTGCTGGGAGCAGAAGTGGCTCTGGAAGCTTCCAGAGCTTGCCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTTGAAAATAACGTCCCACAGTTTCAGATACAGTCTCTTCCTAGTGAGATTAGCAAGAAGGATTACAGGTTCGGACTGAATTCTGAAGTGGACGAGCACAACTTCTTACAGAAAGGATTGGGAAGCACGAGCTATCTCAGTTTTGACTCTACCTCAGACACCATGTGGCCTCATATTTCACAAGTTCCCTCGGACATTGTCTCGGAGTCAAGAAATAGTTCTACCATTGGTAGCAGCTGCTTCCAGTTGGGGACTGTTCGGGATACTGAGCCGCTGAATTTAAACGCTGTGAGATCAAAGCAACATTTCTATGGCGATCAGCTTAGTTTGGCTGGTTGTTTGAAACAGGAATATCATCAGTCCCCGCAGACGACTTTTTCAACCGACTGGCTCTGGAAGAACTCAAGCTCCCCTTCTGTTGAGTATAGATCCAAAAAAGACTCTAGCTGTAATCCTGATAGTATGAATCCCTTTCAGTGA 945 0.4974 MWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRKSLELMPPKLVHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQAASQSSSNLASDVAAAGSRSGSGSFQSLPLHGNGAREGLNLENNVPQFQIQSLPSEISKKDYRFGLNSEVDEHNFLQKGLGSTSYLSFDSTSDTMWPHISQVPSDIVSESRNSSTIGSSCFQLGTVRDTEPLNLNAVRSKQHFYGDQLSLAGCLKQEYHQSPQTTFSTDWLWKNSSSPSVEYRSKKDSSCNPDSMNPFQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1657 314 MobiDBLite consensus disorder prediction 106 146 - -
Alju12g1657 314 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju12g1657 314 ProSiteProfiles WRC domain profile. 69 113 IPR014977 -
Alju12g1657 314 MobiDBLite consensus disorder prediction 290 314 - -
Alju12g1657 314 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju12g1657 314 PANTHER GROWTH-REGULATING FACTOR 5 8 288 IPR031137 GO:0005634|GO:0006351|GO:0032502
Alju12g1657 314 MobiDBLite consensus disorder prediction 111 144 - -
Alju12g1657 314 Pfam WRC 70 112 IPR014977 -
Alju12g1657 314 Pfam QLQ 8 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1657 Alju-ChrAlju12 37806274 37808850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1657 3 115 GRF Transcription Factor Family AT3G13960 58.120 2.47e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Alju12g1657 WRC 1.2e-19 No_clan